| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2276 |
|---|
| Symbol | |
|---|
| ID | 3715617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2626724 |
|---|
| End bp | 2628292 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulatory protein-like |
|---|
| Protein accession | YP_348008 |
|---|
| Protein GI | 77458503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAATTCG TGTTTGAAGA CTACGTGCTC GACCAGCAGC GCCGGGAACT GACCTGGCGC
GGGCAAGTCG TGACTGTCGG GCCGCAGGTC TTCGACTTGC TGCTGCTATT GGTCAGCAAC
CGCGAGCGGG TGGTGAGCAA GGACGAACTG TTGAGCGCCG TATGGAGTGG CCGGATCGTT
TCCGAATCGA CCATCACCAG CCACATCAAC GCTGTGCGCA AGGCCATCGG CGACACCGGT
GAGCAGCAGC GCCTGGTGCG TACGGTGCCG CGCAAGGGCT ATCGCTTCGT CGGCGAAATC
AGCCCGTGCG ACAGCCCCGT CAATGCACCG GAAGCGCCTG CGAAACTCGA AGTGGCCACG
ACACTTGTCC TGCCGGAAAA ACCTTCGATC ACCGTCCTGC CGTTCCAGAA CCTCAGTGGA
GACCCCGAGC AGGACTATTT CGCCGACGGC ATCGTCGAAG ACATCATCAC TGCGTTGTCG
CGCCTGCGCT GGCTGTTCGT CATCGCCCGC AACTCCAGTT TCACCTACAA GGGCAGGGCG
GTGGATGCGC GGGGCGTCGG GCAGGAACTG GGCGTGCGTT ACGTGCTGGA AGGCAGCGTG
CGCAAGTGCG GCAACAAGAT CCGCATCACC GGCCAGTTGA TTGATGCGTG CAGCGGCACG
CACCTGTGGG CCGAGCGCTT CGAAGGCCTG CTCGATGATA TTTTCGAACT TCAGGATCAA
GTGGCCGAGA GCGTTGTGGG CGCCATCGCG CCGCAGCTGG AGCGCGCGGA AATCGAGCGG
GCCAAACGCA AGCCCACCGA CAGCCTCGAT GCCTACGATT ACTATCTGCG AGGGACGGCC
AAGCTGCACA TCGGCACCCG TGAGTCGATC GAACAGGCGC TGGCGCTGTT CTACCGGGCA
ATCGAGCTGG ATCCGGAATT CGCCTCGGCA TACGGCATGG CCGCGTGGTG CCACTTCTGG
CGCAAGCTCA ACGGCTGGAT GACCGACCGG CCCCGGGACG TCGCCGAAGG TGCGCGGCTG
GCGCGCATGG GCGTGGAACT GGGGCGCGAT GACGCCGTGG CGCTGACCCG CTGCGGTCAT
GCCCTGGCCC ATCTGACCGG GGATGTCGAT TGTGGCATTG CTTTGCTGGA TCGGGCTCGA
GTGCTCAACC CCAATCTGGC GCCGGCCTGG TATCTCGGCG GTATCCTGCG CGCCTTGGAT
GGCGAAACCG AAGCCGCCAT TGCCAACCTC GAGCATGCCG TGCGCCTGAG CCCTGTGGAC
CCGGAAATGT TCCGCATGCA GGTCGGGATG GCGTTGGCGC ACTTCTTCGC CGGTCGCTTC
GAATGTTCGG TTTCCTGGGC CGAGAAAGCG CAGGGAAACC TGCCCAGTCT GCTGGTAGCG
GCGGCCCTGA TCGCCGCCAG CCACGCGCTC AATGGGCGAA CCGACAAAGC CAAGCAGGCC
ATGGAACGGC TGCGTCAGCT GGACCCGACG TTGCGGGTGT CCAGCCTGGG CGCGTGGCTG
CCCATTCAAC GGCCTGAAGA CGTTGCCCGG TTTGCCGAAG GTTTGCGGTT GGCGGGGTTG
CCGGAGTAA
|
|---|
| Protein sequence | MQFVFEDYVL DQQRRELTWR GQVVTVGPQV FDLLLLLVSN RERVVSKDEL LSAVWSGRIV
SESTITSHIN AVRKAIGDTG EQQRLVRTVP RKGYRFVGEI SPCDSPVNAP EAPAKLEVAT
TLVLPEKPSI TVLPFQNLSG DPEQDYFADG IVEDIITALS RLRWLFVIAR NSSFTYKGRA
VDARGVGQEL GVRYVLEGSV RKCGNKIRIT GQLIDACSGT HLWAERFEGL LDDIFELQDQ
VAESVVGAIA PQLERAEIER AKRKPTDSLD AYDYYLRGTA KLHIGTRESI EQALALFYRA
IELDPEFASA YGMAAWCHFW RKLNGWMTDR PRDVAEGARL ARMGVELGRD DAVALTRCGH
ALAHLTGDVD CGIALLDRAR VLNPNLAPAW YLGGILRALD GETEAAIANL EHAVRLSPVD
PEMFRMQVGM ALAHFFAGRF ECSVSWAEKA QGNLPSLLVA AALIAASHAL NGRTDKAKQA
MERLRQLDPT LRVSSLGAWL PIQRPEDVAR FAEGLRLAGL PE
|
|---|
| |