| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2258 |
|---|
| Symbol | |
|---|
| ID | 3715638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2591012 |
|---|
| End bp | 2592226 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_347990 |
|---|
| Protein GI | 77458485 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.446431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA CCCGCAATCT CTCCGGCCAC CAACAGAGCG TCACGGCGGT GATCGGCCTG
CTGATCCTGT CCATCGCCCT GCGCCCGCCG ATCATTTCGG TGGGGCCGAT TTTGCTGTTG
ATCCAGCAGC ACTTCCAGTT GAGCTATACC CAGGCCGCGC TGCTGACCTC GATTCCCGAC
GTGTGCATGG GTGTGTTCGC GCTGGTGGTT CCGAGCCTGG CCAGGCGCTT CGGGATCGAT
CGCAGTGTGG TGGTCGCCCT GACGTTGCTG GGGGCCTCGA CCTTGTTGCG GGCGATCTCG
CCGAATGCAT TCTTCCTGCT CGGCAGTACG TTCTTCGCCA GCATCGGCAT TGCGGTTGCC
GGCGCGATGA CCGGCGCCTG GATCAAGACC CACTTTGCTC AGCGACCAGC GCTGTTCATG
GGCATCTACG CCGGCGGCTT GAGTCTGGGC GCGACTCTGG CGGCAGTGCT CAGCGCGCCG
ATTGCCGAGC TGGCGCAGGA CTGGCGGGTC AGCGCCGGGT TCTGGAGCGT GCTGTGCCTC
ACCGCCATCG CCAGTTGGGT GTGGATGGCA CGCCGTTTTG CGACACCGGC GCCTGTAGTG
AAATCGTCGT CGAGTCCGAG CAAACGCCTG CCCTGGAGCA ATCCGCAGGC ATGGCTGATC
GCGTTGAATT TCGGGGCCGG GCAATTCGTG GTCTATGCCC TCTTCGCCTG GATGGCGCCC
GCCTCGGTGG AAGCGGCCAC GTCGAGTGTT TCCCCGGGCG TCCTGCTGGG CATTTTTACC
GCGGTGTTCG CCGTGGCCAG CGTGGGTGCG GGGCTGATTC CGGGCAAGGC CCACGACCGG
CGCGGTCTGC TCGGGTTGTC GGCGTTGCTG GCCCTGCTCG GGGTGGGCGG CATGGCGTTT
CTGCCGGCTT ACTGGCCGAT GCTCTACGTG GTACTTGCGG CCATCGGTCT GGGCATGGGC
TTCACCGTGG CCATGACCTT GCCGCTGGAT CACGCCAGCA CCAGCGAACA GGCCGGGTTG
TGGACGGTGT TCATGTTGTT CATCGGTTAC CTGATCGCCG CGCTCGGGCC GCTGCTGTTC
GGCGCCTTGC GCGAATACGC CGGACACTAT GGCCCGGCGT ACACCTTGCT GTTCGCGGTA
CTGCTGTTGA TGCTCGGCAT CACCCCTCTG CTCAGACTGG CACCGGCAAC ATCTCCGCAG
GTGTCCGTTG CCTGA
|
|---|
| Protein sequence | MAITRNLSGH QQSVTAVIGL LILSIALRPP IISVGPILLL IQQHFQLSYT QAALLTSIPD
VCMGVFALVV PSLARRFGID RSVVVALTLL GASTLLRAIS PNAFFLLGST FFASIGIAVA
GAMTGAWIKT HFAQRPALFM GIYAGGLSLG ATLAAVLSAP IAELAQDWRV SAGFWSVLCL
TAIASWVWMA RRFATPAPVV KSSSSPSKRL PWSNPQAWLI ALNFGAGQFV VYALFAWMAP
ASVEAATSSV SPGVLLGIFT AVFAVASVGA GLIPGKAHDR RGLLGLSALL ALLGVGGMAF
LPAYWPMLYV VLAAIGLGMG FTVAMTLPLD HASTSEQAGL WTVFMLFIGY LIAALGPLLF
GALREYAGHY GPAYTLLFAV LLLMLGITPL LRLAPATSPQ VSVA
|
|---|
| |