Gene Pfl01_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2247 
Symbol 
ID3715627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2577697 
End bp2578416 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID 
ProductLuxR family transcriptional regulator 
Protein accessionYP_347979 
Protein GI77458474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.788747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCCG GACCTGCCGA AGCACTCTTG CGCGCCGCCC TCGACATCGA GGCGGCGCCC 
ACGCTGGTGG CGATCCAGAA GGCCGTTCGC GGTTTCGCCG GGGCCTATGG TTACGATCGG
TTCGTCCTGT TCTCCGCCAC CTCGGCGTCG GAGGACGTGG TCGAGCGCAT TTATTGGGTG
GAAGGCGACT GGTTCGGCGA CGGCATCGCT GTCGACGCCC AGACCTACGT TCAGCGCTGC
CCAGTGACTC GCCACCTGTT GGACGCCCGC GAATCGTTCT TCTGGAGCAA GGTGCAGGAG
CAGAGCGGCG AACTGTATCG GCTGGTTCGC GTGCCAAGCG GCCCGGGCGT GCATGGATTG
CAGATTCCGG TCTTCGGTCC ACAAGGGCTT GAAGGCGCCA TGAGTCTGGG TGGCGAACAG
ATCGATGCCT CGGCGCGGGT TCGTCTGGCG CTGGGCATGC TCGCCTCGGT GGCGTTTTTC
TCCGCCCGAC GCTTGCTCGA AGCGCCGCTG GACGAGACGG CCGGAAAACT CTCGACCCGC
GAGCGCGAAG TGCTGGCGTG GGTCGCCGCC GGTCGCCGGC AGGCCGACAT CGCCGCCACA
CTCGGCTTGT CCGGGCGCAC GGTGGAAAAT CACCTGCGTT CGGCGCGTCG GCATCTGGGC
GTGGCCACCA CTGCTCAGGC CATCAAAATT GCCATTCGCA AGGGTGAAAT AAAGGGGTGA
 
Protein sequence
MSSGPAEALL RAALDIEAAP TLVAIQKAVR GFAGAYGYDR FVLFSATSAS EDVVERIYWV 
EGDWFGDGIA VDAQTYVQRC PVTRHLLDAR ESFFWSKVQE QSGELYRLVR VPSGPGVHGL
QIPVFGPQGL EGAMSLGGEQ IDASARVRLA LGMLASVAFF SARRLLEAPL DETAGKLSTR
EREVLAWVAA GRRQADIAAT LGLSGRTVEN HLRSARRHLG VATTAQAIKI AIRKGEIKG