Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2247 |
Symbol | |
ID | 3715627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2577697 |
End bp | 2578416 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | LuxR family transcriptional regulator |
Protein accession | YP_347979 |
Protein GI | 77458474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.788747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTCCG GACCTGCCGA AGCACTCTTG CGCGCCGCCC TCGACATCGA GGCGGCGCCC ACGCTGGTGG CGATCCAGAA GGCCGTTCGC GGTTTCGCCG GGGCCTATGG TTACGATCGG TTCGTCCTGT TCTCCGCCAC CTCGGCGTCG GAGGACGTGG TCGAGCGCAT TTATTGGGTG GAAGGCGACT GGTTCGGCGA CGGCATCGCT GTCGACGCCC AGACCTACGT TCAGCGCTGC CCAGTGACTC GCCACCTGTT GGACGCCCGC GAATCGTTCT TCTGGAGCAA GGTGCAGGAG CAGAGCGGCG AACTGTATCG GCTGGTTCGC GTGCCAAGCG GCCCGGGCGT GCATGGATTG CAGATTCCGG TCTTCGGTCC ACAAGGGCTT GAAGGCGCCA TGAGTCTGGG TGGCGAACAG ATCGATGCCT CGGCGCGGGT TCGTCTGGCG CTGGGCATGC TCGCCTCGGT GGCGTTTTTC TCCGCCCGAC GCTTGCTCGA AGCGCCGCTG GACGAGACGG CCGGAAAACT CTCGACCCGC GAGCGCGAAG TGCTGGCGTG GGTCGCCGCC GGTCGCCGGC AGGCCGACAT CGCCGCCACA CTCGGCTTGT CCGGGCGCAC GGTGGAAAAT CACCTGCGTT CGGCGCGTCG GCATCTGGGC GTGGCCACCA CTGCTCAGGC CATCAAAATT GCCATTCGCA AGGGTGAAAT AAAGGGGTGA
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Protein sequence | MSSGPAEALL RAALDIEAAP TLVAIQKAVR GFAGAYGYDR FVLFSATSAS EDVVERIYWV EGDWFGDGIA VDAQTYVQRC PVTRHLLDAR ESFFWSKVQE QSGELYRLVR VPSGPGVHGL QIPVFGPQGL EGAMSLGGEQ IDASARVRLA LGMLASVAFF SARRLLEAPL DETAGKLSTR EREVLAWVAA GRRQADIAAT LGLSGRTVEN HLRSARRHLG VATTAQAIKI AIRKGEIKG
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