Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2245 |
Symbol | |
ID | 3715664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2574798 |
End bp | 2576657 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ABC transporter, transmembrane region |
Protein accession | YP_347977 |
Protein GI | 77458472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.20584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGCC TGTTTGAACA ACGGCTCGAC CCCTTCCCGC CCGACGAAGC GCCGCCACCG CCGGTCGGTC TGGCGCGATT CCTGTGGGCC TGCACCCGTG GCGCTCGCGG CTATATCCTC GCGTTGGCGC TGCTCAGTGC CGGTGTGTCG ATCTACGAAG CCTGGTTGTT TTCCTTTTTG GGTCAGGTCG TGGATCTGCT CTCGACCTGG CAGGCCGGCG GCGATGTGAA CGGCCAGGAG AGCCGCGTGC TGTGGGGCAT CGGCATCGTG TTGCTGACCA GCGTCGGGCT GGTGGCGCTG CGCACCATGG TTCAGCATCA GGTGTTGGCG ATCAATCTGC CGCTGCGTCT GCGCTGGGAT TTCCATCGAC TGATGCTGCG GCAGAGCCTT TCGTTCTTCT CCGACGAGTT TTCCGGTCGG GTCACGACCA AGGTGATGCA GACGGCGCTG GCCGTGCGCG AGGTGCTGTT CACCGTCATC GAAATCGCAC CGGGTATCGG CGTCTATTTC ATTGCGATCA TCGCCCTGGC CGGCGGCTTC GCCCTGAAAC TCATGCTGCC GTTCATTGCC TGGGTCGCGC TGTTCGGGCT GGCGATGCTG TATTTCGTAC CGCGCCTGGG CCAGGTCGGC CAGGAACAGG CCCATGCGCG CTCGTCGATG ACGGGCCGGG TGTCGGACGC CTACACCAAC ATCACCACCG TCAAACTGTT CTCCCACTCC AAACGTGAAG CGCATTTTGC GCGGGCGGCG ATGGAGGATT TCAAGCAGAC CGGTTTCCGC CAGATGCGTC TGGTCAGCCA GTTCGAGATC GTCAATCAGG CGCTGGTGGT CGGGCTGATC ATGGGCGCCG GCGGCTACGC CTTGTGGCTG TGGCATCAGG GCGAAGTCGG CACCGGGGCG GTGGCGGCGA TTACGGCCAT GGCGTTGCGC ATCAACGGCA TGTCGCACTG GATCATGTGG CAGATGACGT CGCTGTTCGA AAACATCGGC ACGGTGCAGG ACGGCATGGA CACCCTGACC CGTGGCCCCA AGGTCCAGGA TGCGCCGGAC GCCGGCGTGC TGGTGCCTTC CGGCGGCGCC GTGGAATTCG ACAACGTGAG CTTCAACTAC AACGGCGAAC GCCAGGTGCT CGACGGCTTG AGCCTGAGCA TCCGACCGGG GGAAAAAATC GGTCTGGTGG GCCGCTCCGG CGCCGGTAAA TCCACGCTGA TCAATCTGCT GCTGCGCTTC TATGACGTGG ATCGCGGCGA GATTCGCATC GACGGGCAAA ACATCGCGCA GGTGACACAG GACAGCCTGC GCAGCGCGAT CGGCATGGTC ACTCAGGACA CGTCCCTGCT GCACCGCTCG ATTCGCGACA ACATCGCCTA CGGCCGACCG GACGCCACCG ACGAACAGAT CCAGCGTGCT GCGGCCAACG CCCAGGCCGA CGGCTTCATC AACCAGCTCA GCGACCGCCA GGGCCACACC GGCTACGACA CCCTGGTGGG CGAGCGCGGC ATCAAGCTTT CCGGTGGCCA GCGCCAGCGC ATTGCCATTG CCCGGGTGAT GCTCAAGAAC GCGCCGATCC TTCTACTGGA CGAAGCGACA AGCGCCCTGG ATTCCGAAGT CGAAGTCGCC ATCCAGGAAA GCCTCGATGA AATGATGCAG GGCAAGACCG TGATCGCGAT TGCGCATCGA CTGTCGACGA TTGCGGCGAT GGATCGACTG ATTGTCATGG ATGAGGGGCG CATCATCGAG CAAGGCACCC ACACCGAACT GCTGGCCAAG AACGGCACCT ATGCGCGGCT TTGGCAGCAC CAGAGTGGCG GGTTTCTGGG TGAGGATCAG GGGCTGACTG AGGCGATGGA TCAGGCGTAA
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Protein sequence | MLRLFEQRLD PFPPDEAPPP PVGLARFLWA CTRGARGYIL ALALLSAGVS IYEAWLFSFL GQVVDLLSTW QAGGDVNGQE SRVLWGIGIV LLTSVGLVAL RTMVQHQVLA INLPLRLRWD FHRLMLRQSL SFFSDEFSGR VTTKVMQTAL AVREVLFTVI EIAPGIGVYF IAIIALAGGF ALKLMLPFIA WVALFGLAML YFVPRLGQVG QEQAHARSSM TGRVSDAYTN ITTVKLFSHS KREAHFARAA MEDFKQTGFR QMRLVSQFEI VNQALVVGLI MGAGGYALWL WHQGEVGTGA VAAITAMALR INGMSHWIMW QMTSLFENIG TVQDGMDTLT RGPKVQDAPD AGVLVPSGGA VEFDNVSFNY NGERQVLDGL SLSIRPGEKI GLVGRSGAGK STLINLLLRF YDVDRGEIRI DGQNIAQVTQ DSLRSAIGMV TQDTSLLHRS IRDNIAYGRP DATDEQIQRA AANAQADGFI NQLSDRQGHT GYDTLVGERG IKLSGGQRQR IAIARVMLKN APILLLDEAT SALDSEVEVA IQESLDEMMQ GKTVIAIAHR LSTIAAMDRL IVMDEGRIIE QGTHTELLAK NGTYARLWQH QSGGFLGEDQ GLTEAMDQA
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