Gene Pfl01_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2238 
Symbol 
ID3715657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2568586 
End bp2569113 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_347970 
Protein GI77458465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCAAAACCCT CTTCATCACC GGCGTCAGCA GCGGCTTCGG CCACGCGCTG 
GCCAAGGAAG CGCTGGCTGC CGGTCACCGC GTCATCGGCA CCGTGCGCAG CGGAGCCGAC
CTGCAAGCCT TTCAGGCGCT GTCCATCGAC AACGCGTACG GCGTGCTGCT GGACGTCACC
GACTTCGACC GCATCGAAGG CGTCGTGGCG ACTGTCGAAG CGACCCACGG CCCGGTCGAT
GTGCTGGTCA ACAACGCCGG CTACGGCCAC GAAGGCATTT TAGAAGAATC GCCGCTGGAG
GACATGCGCC GCCAGTTCGA CGTGAATGTG TTCGGCGCGG TCGCGGTGAC CAAGGCGTTT
GTGCCGTTCT TTCGCCAGCG GCGGGCGGGT CATATTCTCA ATATCACCTC GATGGGCGGC
ACAATCACCA TGCCGGGTAT CGCGTACTAC TGTGGCAGCA AGTTTGCGCT CGAAGGCGTT
GCGCCATGCC ATGACTGCCT CAGCGGCGGC GTTCAGTGTC GGCTATGA
 
Protein sequence
MTTTKTLFIT GVSSGFGHAL AKEALAAGHR VIGTVRSGAD LQAFQALSID NAYGVLLDVT 
DFDRIEGVVA TVEATHGPVD VLVNNAGYGH EGILEESPLE DMRRQFDVNV FGAVAVTKAF
VPFFRQRRAG HILNITSMGG TITMPGIAYY CGSKFALEGV APCHDCLSGG VQCRL