Gene Pfl01_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2230 
Symbol 
ID3715649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2559194 
End bp2559871 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID 
ProductThiJ/PfpI 
Protein accessionYP_347962 
Protein GI77458457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.346275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT TGATGGTTCT GACTTCCCAC GATCAACTCG GCAATACCGG CAAGAAGACC 
GGCTTCTGGC TCGAAGAGTT CGCCGCCCCC TACTACGCCT TCAAGGACGC CGGCGCCGAC
GTCACCCTGG TTTCGCCCGC TGGCGGCCAG CCTCCGCTGG ATCCGAAGAG CGACGAGCCC
GACGCTCAGA CGACTGAAAC CGATCGCTTC CGCCAGGACC CTGAGGCCCA ACAGGCACTC
GCGAGCACCG GCCGCCTGGC CGACGTCCGC GCCGAAGATT TCGATGCCGT GTTTTATCCA
GGTGGCCATG GCCCGCTCTG GGACCTGGCT GAAGACAAGC ATTCGATTGC CCTGATCGAA
GCCTTCGCGC GCAGCAACAA GCCCCATGGT TTTGTCTGCC ACGCACCGGG GGTACTGCGT
CATGTGGTCG ATACGGACGA TAAACCGCTG ATCCAGCATC GCGAAGTGAC CGGTTTCACC
AATTCCGAAG AGGCGGCCGT CGGTTTGACA GATGTCGTAC CTTTCCTGAT CGAAGACGAG
TTTCAGCGTC TTGGCGGTCG CTATTCCAAA GTTGCCGACT GGCAGGTTCA TGTAGTGACT
GATGGAAATC TGGTGACCGG CCAGAATCCT GCCAGCTCGG CAGCTGTCGC CGAAAAACTG
CTGAAGCTGC TGGGCTGA
 
Protein sequence
MKILMVLTSH DQLGNTGKKT GFWLEEFAAP YYAFKDAGAD VTLVSPAGGQ PPLDPKSDEP 
DAQTTETDRF RQDPEAQQAL ASTGRLADVR AEDFDAVFYP GGHGPLWDLA EDKHSIALIE
AFARSNKPHG FVCHAPGVLR HVVDTDDKPL IQHREVTGFT NSEEAAVGLT DVVPFLIEDE
FQRLGGRYSK VADWQVHVVT DGNLVTGQNP ASSAAVAEKL LKLLG