Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2230 |
Symbol | |
ID | 3715649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2559194 |
End bp | 2559871 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ThiJ/PfpI |
Protein accession | YP_347962 |
Protein GI | 77458457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.346275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT TGATGGTTCT GACTTCCCAC GATCAACTCG GCAATACCGG CAAGAAGACC GGCTTCTGGC TCGAAGAGTT CGCCGCCCCC TACTACGCCT TCAAGGACGC CGGCGCCGAC GTCACCCTGG TTTCGCCCGC TGGCGGCCAG CCTCCGCTGG ATCCGAAGAG CGACGAGCCC GACGCTCAGA CGACTGAAAC CGATCGCTTC CGCCAGGACC CTGAGGCCCA ACAGGCACTC GCGAGCACCG GCCGCCTGGC CGACGTCCGC GCCGAAGATT TCGATGCCGT GTTTTATCCA GGTGGCCATG GCCCGCTCTG GGACCTGGCT GAAGACAAGC ATTCGATTGC CCTGATCGAA GCCTTCGCGC GCAGCAACAA GCCCCATGGT TTTGTCTGCC ACGCACCGGG GGTACTGCGT CATGTGGTCG ATACGGACGA TAAACCGCTG ATCCAGCATC GCGAAGTGAC CGGTTTCACC AATTCCGAAG AGGCGGCCGT CGGTTTGACA GATGTCGTAC CTTTCCTGAT CGAAGACGAG TTTCAGCGTC TTGGCGGTCG CTATTCCAAA GTTGCCGACT GGCAGGTTCA TGTAGTGACT GATGGAAATC TGGTGACCGG CCAGAATCCT GCCAGCTCGG CAGCTGTCGC CGAAAAACTG CTGAAGCTGC TGGGCTGA
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Protein sequence | MKILMVLTSH DQLGNTGKKT GFWLEEFAAP YYAFKDAGAD VTLVSPAGGQ PPLDPKSDEP DAQTTETDRF RQDPEAQQAL ASTGRLADVR AEDFDAVFYP GGHGPLWDLA EDKHSIALIE AFARSNKPHG FVCHAPGVLR HVVDTDDKPL IQHREVTGFT NSEEAAVGLT DVVPFLIEDE FQRLGGRYSK VADWQVHVVT DGNLVTGQNP ASSAAVAEKL LKLLG
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