| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2229 |
|---|
| Symbol | |
|---|
| ID | 3715648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2557951 |
|---|
| End bp | 2559075 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_347961 |
|---|
| Protein GI | 77458456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACA GCAGTTTCTT TACACCCGTC ACCCTGGGCC GCCACATCCT GAAAAACCGC
ATTGTCCTGC CGCCCCTCAC CCGCCAGCGC AGCACCCAAC CGGGCAATGT CGCCAATGAA
TTGATGGCCG AGTATTACCA GCAACGTGCC GGTGCCGGTT TGCTGGTGAC TGAAGGCACC
CAGATCGAGC CTCGTGGGCA GGGATACGCC TGGACTCCAG GCATTCATAC ACCCGAACAA
ATCGTCGGGT GGCGCAAGGT CACCGAGGCT GTCCACGCCA GTGACGGCGT GATTTTCGCG
CAGCTATGGC ATGTCGGTCG CGTATCCCAT ACTGCCCTGC AACCCAATGG CGACGCACCG
GTGTCGGCCT CCGCCATCGC CACCGACCGG GTCAGTGTGT TCATCGAAAC CGCGCCCGGT
GTGGGCGCTC TGGTTCCGCC GTCCGCGCCT CGAGCGCTGA CCACCGATGA AGTCCAGGAA
CTGGTTCAGC TATACATCCA GGCGGCGCGC AATGCCATGG ACGCCGGTTT TGACGGTATC
GAACTGCACT GCGCCAATGG TTATCTGGTA AACCAGTTCA TCTCCGCCCA CAGCAACCTG
CGCACCGATC AGTACGGCGG TTCGTTGCAC AATCGCCTGC GTTTTCTGCG CGAAGTAGTC
GCCGGGGTCG CCAAGTGCAT CGGCAAGGAA AAAGTCGGTG TGCGCTTCGC GCCGCTGTTC
ACCACCACCG ATGAAGCGCG GACTTACCTG GGCATGGTCG AGGAAGATCC GCACACCACT
TACATCGAAG CGATCAAGGT GCTGCAAGAC GTCGGCATTG CTTACCTGTC TATTGCAGAA
GCCGACTGGG ACGACGCGCC AGTGATGCCG CAAACCTTCC GTCGAGCGGT GCGCGACACC
TTCGGCGGCG CGATCATTTA CGCGGGTCGC TACAACGCCG AAAGCGGTGC ACGCTTGCTG
GAATCAGGAC TGGCGGATCT CGTGGCTTTC GGTCGTCCGT TCATGGCCAA TCCGGACCTG
CCCGCGCGCA TCGCCAATGA CTGGCCGCTG AATTCGCTGA ACCCGGCTAC GGTGTATGGC
GGTGATGCCG AAGGCTATGT GGATTACCCG GTGTACGGAG AGTAG
|
|---|
| Protein sequence | MNHSSFFTPV TLGRHILKNR IVLPPLTRQR STQPGNVANE LMAEYYQQRA GAGLLVTEGT
QIEPRGQGYA WTPGIHTPEQ IVGWRKVTEA VHASDGVIFA QLWHVGRVSH TALQPNGDAP
VSASAIATDR VSVFIETAPG VGALVPPSAP RALTTDEVQE LVQLYIQAAR NAMDAGFDGI
ELHCANGYLV NQFISAHSNL RTDQYGGSLH NRLRFLREVV AGVAKCIGKE KVGVRFAPLF
TTTDEARTYL GMVEEDPHTT YIEAIKVLQD VGIAYLSIAE ADWDDAPVMP QTFRRAVRDT
FGGAIIYAGR YNAESGARLL ESGLADLVAF GRPFMANPDL PARIANDWPL NSLNPATVYG
GDAEGYVDYP VYGE
|
|---|
| |