Gene Pfl01_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2224 
Symbol 
ID3715692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2546987 
End bp2547823 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_347956 
Protein GI77458451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000575993 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTC GAAACCGTCG CCATCCCATA ACCGTTGATG AACCGATACG TCGTGTCGAA 
GCCGGCCCGT GGGCGATCGA GCTGCTGCCG GGCGCAGCCT ACTCGGTGCG GTACGTGGCG
ACCCAATCAG CGATCGGCTT TGCCTTCGAC AGCCAGCGCG GCGTGCACGC CATTGGTACT
GACCGGATAC GCCCCTTCGA TGCGATGCCC AATGGCCTGG CGTTTGTTCC GGCTGGATGT
GACGTGTTGT CCGAGTCACC CACGGGCGGC GAGTACCTGC GAGTGATACG CACGGACGGC
ACGGCACTGG CGGGAGACAG TGCGTTCAAC AATCGCATCG ACCCGCAGGC CATTCACCTC
GCGTCGCGAA TGCGCAATGC GCTGTTGCAA GCCTCTCTGG ATGATGACTG GGAAAGCTGG
GCGCTCAACC TGGCTGAACG GGTTGAGGGC CATGAGGCGG CAATGCATCA AGGCTCGATC
ACCGGCAGCC GAATGCGCCT GCTGGATGAA TTCATTGACG CCGGTCTCGG CAGCCCGCTC
GCCGTCCCGG CGATGGCGCA ATTGCTGGAG TTGTCCGAAG GTTATTTCAT GCGCGCCTTC
AAGCAGGCGA CCGGCAAAAG CCCTCACAGT TACCTGATCG ACAGACGCCT GGCCAAAGCC
CGAGCGTCAA TGCGCGATAC AACGGCCAGC CTCTCGCAGA TAGCCCTCGC TTGCGGTTTC
AACTCGCAGG CGCATATGAC CACAGCCTTC AAACAGCGCC TCGGCGTGAG TCCGGCGCAA
TTGCGCACAG ATTCGCGCCA TAGCTCTGCT ACCGACAAAC AACATTCTTC TATATAG
 
Protein sequence
MSPRNRRHPI TVDEPIRRVE AGPWAIELLP GAAYSVRYVA TQSAIGFAFD SQRGVHAIGT 
DRIRPFDAMP NGLAFVPAGC DVLSESPTGG EYLRVIRTDG TALAGDSAFN NRIDPQAIHL
ASRMRNALLQ ASLDDDWESW ALNLAERVEG HEAAMHQGSI TGSRMRLLDE FIDAGLGSPL
AVPAMAQLLE LSEGYFMRAF KQATGKSPHS YLIDRRLAKA RASMRDTTAS LSQIALACGF
NSQAHMTTAF KQRLGVSPAQ LRTDSRHSSA TDKQHSSI