Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2209 |
Symbol | |
ID | 3715711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2494414 |
End bp | 2495832 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_347941 |
Protein GI | 77458436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGGT TGCCGATTTC CCTGCTGACC GCCGCGCTGC TGCTGGGCGG TTGCTCGTTG ATTCCCGATT ACCAGCGACC GGCATCGCCG AGCGCGGCGC AGTATCCGCA AGGTCCGGCG TATGCCGCGC AATCCCCTGT CACGCCCCGG GTCGAAGACT GGCGCGCGCT GTTCAATGAC CCGGCGTTGC AGCAATTGAT TGAAAGCGCG CTGGTCAACA ACCGTGACCT GCGGGTCGCT GCGCTGAATG TCGAGGCGTT TCAGGCGCAG TACCGGATCC AGCGCGCCGA TCTGCTGCCG GCGGTGTCGG CCAACGCCAA CGAACTGCGC CAGCGGGTGC CGTCCAGCGT GACCCGCACC AAGGCGGCGA TCACCTCGAC CTACTCGGTG AATCTGGGCA TCAGCGCCTA TGAACTGGAC TTCTTCGGCC GGGTGCGCAG TCTCAGCGAG CAGGCGCTGC TGACCTGGCT GTCCACCGAA GAGGCGCGGC GCAGTGCGCA ATTGAGTCTG GTGGCCAATG TCGCCAATGC CTACCTGACC TGGCGTGCCG ATCAGGAGTT GCTGGCACTG GCTCAGGAGA CGCTGGCCGC CGACGAGCGC AGCCTGCACC TGACCACCCG CAACCGCGAG GCCGGCAAGT CCTCGGCGCT GGATCAGATT CAGGCGCAGA CCAGTGTCGA CAGCACCCGC GCGAGCCTGG CCCGTTATCA GCGCCAGGTC GCCCAGGACT TGAACAGCCT GACGCTGCTG GTGGGCGCGC CGGTGCCCGA GCACCTGCCG GCGCGTCCGC TGGACAGTGA TCTTGTGGCA ACCGTGCCGG CCGGATTGCC CTCGGATCTG CTGCAACGCC GACCGGACAT TCTCCAGGCC GAATACAAGC TGCGCGCCGC CAATGCCAAC ATCGGCGCGG CGCGGGCGGC GTTTTTCCCG AGTGTCAGCC TGACCGCCAA TGCCGGGACA TCCAGCCGCG ATCTGTCCAG GCTGTTCAAG GGCGGCTCCG GGACCTGGAC GTTCCAGCCG CAGATCAACT TGCCGATTTT CAACGCCGGC AGTCTGCGCG CCAGCCTGGA TTACGCGAAG CTGCAAAAAG ACATCACCGT CGCCGAGTAC GAAAAGACCA TTCAGACGGC ATTCCAGGAA GTGTCCGACG GCCTTGCGGC ACGCCAGACC TACGAACAGC AACTCCAGGC CCAACGCGAT CTGGTGCAGG CGACCCAGGA TTACTACGAC ATGGCGCAGC ATCGCTATCG AAGCGGCGTC GACAGCAGCC TGACGTTCCT TGATGCCCAG CGTTCGCTGT TCAGTTCCCA GCAAGGACTG ATTACCGATA GGTTGGCGCA GCTGGTGGCG CAAGTGAATC TGTACACCGC GCTGGGCGGT GGCTGGAGCC CGGTCGAGCC GCTTCCGCCA GCACCTTGA
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Protein sequence | MPRLPISLLT AALLLGGCSL IPDYQRPASP SAAQYPQGPA YAAQSPVTPR VEDWRALFND PALQQLIESA LVNNRDLRVA ALNVEAFQAQ YRIQRADLLP AVSANANELR QRVPSSVTRT KAAITSTYSV NLGISAYELD FFGRVRSLSE QALLTWLSTE EARRSAQLSL VANVANAYLT WRADQELLAL AQETLAADER SLHLTTRNRE AGKSSALDQI QAQTSVDSTR ASLARYQRQV AQDLNSLTLL VGAPVPEHLP ARPLDSDLVA TVPAGLPSDL LQRRPDILQA EYKLRAANAN IGAARAAFFP SVSLTANAGT SSRDLSRLFK GGSGTWTFQP QINLPIFNAG SLRASLDYAK LQKDITVAEY EKTIQTAFQE VSDGLAARQT YEQQLQAQRD LVQATQDYYD MAQHRYRSGV DSSLTFLDAQ RSLFSSQQGL ITDRLAQLVA QVNLYTALGG GWSPVEPLPP AP
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