Gene Pfl01_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2205 
Symbol 
ID3715707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2491510 
End bp2492523 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID 
ProductABC transporter, periplasmic substrate-binding protein 
Protein accessionYP_347937 
Protein GI77458432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAC CGTTCAAACG TTCTGCACTG ACGCTGCTGG CGGCCTCGCT GGCTGGCGCA 
CTGCTCGGCA ACACTGCGCA AGCCGAAGGC AAGATCAGCA TCGCCCAGCA ATTCGGCATC
GGTTATCTGA TTCTGGATGT GGTGCGCGAT CAGCAATTGA TCGAGAAACA CGGCAAGGCT
CAGGGTCTGG ACATCAAGGT CGACTGGAAC AGCATTTCCG GCGCCACCGC GATGAACGAA
GCATTGCTCA CCGGATCGCT GGACGTGGTC TCGGCGGGCG TGCCGCCGAT GCTCACCGTA
TGGGATCGCA CCAAGGGCAA GCAGAACGTC AAGGCCATCG CTTCGCTGGG TTCGATGCCC
AACTACCTGC TGACCAATAA CCCGAACGTG AAAACCCTCA AGGACTTCAG CGACAAGGAT
CGCATCGCCG TGCCGGCGGC GGGCGTGGGC TTCCAGTCAC GCACGCTGCA GATCGAAACG
GCCAAGGAAT TCGGCAATGA CCACTACAAG AAATTCGACG ACATCTCCGT CAGCCTGCCG
CACCCGGATG CCACGGCTGC ACTGATCGCC GGCGGCTCGG AAATCAACGC GCATTTCTCC
AGCCCGCCGT TCCAGTATCA GGCGTTGCAG AATCCCAACG TGCACAAAGT GCTGAGTTCC
TACGACGTGC TCGGCGGCCA GGCCACGTTC AACGTGCTCT ACACCACGGA AAAATTCCAC
GACGAAAACC CGAAAACCTA CAAGGCTTTC TATGACGCCT TGGCCGAGGC CGAGAAGATC
ATCAAGGCCG ACAAACCTGC GGCGGCTCAG GCCTACATTC GGGTTGAACA GTCAAAGCTG
CCGCTGGCGC TGGTTGAGAA AATCGTCACC GACCCGGAAA TCGATTTCAC CGTGGTGCCG
CAACGCACCT TTATCTATGC AGAGAAATTG CAGGAGCTGG GCGTGCTGAA GAACAAGGCG
GACAGCTGGA AGGATTATTT CTTTGAAGAG GCGCATGGCG GGGCGGGAAG TTGA
 
Protein sequence
MTLPFKRSAL TLLAASLAGA LLGNTAQAEG KISIAQQFGI GYLILDVVRD QQLIEKHGKA 
QGLDIKVDWN SISGATAMNE ALLTGSLDVV SAGVPPMLTV WDRTKGKQNV KAIASLGSMP
NYLLTNNPNV KTLKDFSDKD RIAVPAAGVG FQSRTLQIET AKEFGNDHYK KFDDISVSLP
HPDATAALIA GGSEINAHFS SPPFQYQALQ NPNVHKVLSS YDVLGGQATF NVLYTTEKFH
DENPKTYKAF YDALAEAEKI IKADKPAAAQ AYIRVEQSKL PLALVEKIVT DPEIDFTVVP
QRTFIYAEKL QELGVLKNKA DSWKDYFFEE AHGGAGS