Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2183 |
Symbol | |
ID | 3715724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2466832 |
End bp | 2468310 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_347915 |
Protein GI | 77458410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.96919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCAT CCATACGTAA GTCCGTCAAT TCAGATGCAT TGACCCGCCT GGCGCAAGCC ATCGCGGTGG CTGTGTCCGC CACGCTGGCG GGCTGTTCCA GCCATGCTCC GCAGACTGAA GCGACGCATA CGCCGAACAT TGCTGCGCGA GCCAAGCAGA AGCCCATCTG GCTGTCGGAA AAGCCCAGCC CGCAGGTGCC TCAGGACATC TGGGAGCGCA TGCGCAGTGG TTTCCAGCTG CAGGAAGGTC TGGGCGTGAA CCCGCGCATC GAGCAACAGC GCCTGTGGTT CGCCAGTAAC CCTTCCTTTC TCGAGAACGC CGGCGAACGC GGCAGCCTCT ACATTCATTA CATCGTCGAG CGCCTCGAAG AACGCAACAT GCCGCTGGAA CTGGCACTGC TGCCGGTCAT CGAAAGCGCC TACAACCCGA TGGCCTATTC CCGGGCCGAC GCGGTGGGCC TCTGGCAGTT CATCCCGTCC ACCGGGCGCT ACTTCAACCT GCGCCAGACC CGTTTCTACG ATGGCCGTCG CGACATTACC GCGTCGACCA CGGCAGCGAT GGACTACCTG ACCCGCCTGC ATGACATGTT CAACGGCGAC TGGCTGCTGG CCCTGGCCGC GTACAACGCC GGTGAAGGCA CGGTCAGCCG CGCCATCGAG CGCAACGAAA AGCTCGGCCT GCCGACCGAC TACTGGAACC TGCCACTGCC GGCGGAAACC CAGGCTTACG TGCCGAAACT GCTGGCGCTC TCGCAAGTGG TGCTGACGCC CGAAGCCTAT GGCGTGAACC TCAACCCGAT CGCCAACGAA CCGTATTTCC AGGTCGTCGA AATCAACCAG CGCATGGACC TGTCCAAGGT CGCAGCGGTG GCCAACATCG ACGAAGACGA GTTGTTCCAG CTCAACCCGG CGTTCAAGCA GCGCACCACC ATCGACGGCC CGCAGCACCT GCTGGTGCCG ACCTCGAAGG CGCAACTGCT GACCGCCAGC CTGCAGACCA TGCGCCCTGA AGAGCTGATC AGCCCGCGTT CGCTGAAACC GGTGTTCGAA GGCGCCGATC CAAGCGAAAT TGCACAGGCC AAGCGCGCCT ATAGGGTCAA GCGTGGCGAC AACCTTGGTT CCATCGCCAA GGCCAACAAG GTCGAGGTCA AAGACCTGCA ACGCTGGAAC AAGCTGACCG GCAAGAACCT CAAGGTCGGC CAGACCCTGG TCATGCAGGA CACCACCAGA CGCACCCCGG CGCGTAACAG TGGCGGACGC ATCAATACGG TTGTCGCGGC CAACAGCAAG ACCAGCAGCA AGACCAAAGC CAATGACGAC GGCAAGCAAC AGACCCAGTA CAAGGTCAAA CGTGGCGACA CGCTGTACGT GGTGGCCAAG CGCTTCAACG TCGAGATGCA ACATCTCAAG CGCTGGAATC CGGGCGCCGG CAAGGCGCTC AAGCCTGGGC AGATGCTCAC GGTCTACCAG CCGCACTGA
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Protein sequence | MSSSIRKSVN SDALTRLAQA IAVAVSATLA GCSSHAPQTE ATHTPNIAAR AKQKPIWLSE KPSPQVPQDI WERMRSGFQL QEGLGVNPRI EQQRLWFASN PSFLENAGER GSLYIHYIVE RLEERNMPLE LALLPVIESA YNPMAYSRAD AVGLWQFIPS TGRYFNLRQT RFYDGRRDIT ASTTAAMDYL TRLHDMFNGD WLLALAAYNA GEGTVSRAIE RNEKLGLPTD YWNLPLPAET QAYVPKLLAL SQVVLTPEAY GVNLNPIANE PYFQVVEINQ RMDLSKVAAV ANIDEDELFQ LNPAFKQRTT IDGPQHLLVP TSKAQLLTAS LQTMRPEELI SPRSLKPVFE GADPSEIAQA KRAYRVKRGD NLGSIAKANK VEVKDLQRWN KLTGKNLKVG QTLVMQDTTR RTPARNSGGR INTVVAANSK TSSKTKANDD GKQQTQYKVK RGDTLYVVAK RFNVEMQHLK RWNPGAGKAL KPGQMLTVYQ PH
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