Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2178 |
Symbol | |
ID | 3715758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2459275 |
End bp | 2460885 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_347910 |
Protein GI | 77458405 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCAGG ACAATCTGAT CGAAATCCGC GACCTGGCCG TCGAATTCGG TTTCGGCGAG CGTGTGCACC GGGTCGTGGA AGGCGTGAGT TTCGACATCA AGCGCGGTGA AACCCTCGCG TTGGTCGGCG AATCCGGCTC GGGCAAATCG GTGACCGCGC ACTCGATCCT GCGCTTGCTG CCCTACCCGC TGGCGCGGCA TCCGGCCGGC AGCATCAATT ATTCCGGGCA GAACCTGCTG GAACTGGGCG AAAAGACCAT CCGTCACATT CGCGGCAACC GGATCGCGAT GATCTTTCAG GAGCCGATGA CCTCGCTCAA CCCGCTGCAC TCGATCGAGA AGCAGATCAA CGAGGTGCTG GGTATCCACA AGGGCCTGAC CGGCAAAGTC GCGACCAAGC GCACGCTGGA GTTGCTGGAG ATGGTCGGCA TCCCCGAGCC GCACAAGCGC CTCAAGGCCC TGCCCCACGA ATTGTCCGGC GGCCAGCGTC AGCGGGTGAT GATCGCCATG GCCCTGGCCA ACGAGCCGGA ACTGCTGATC GCCGACGAAC CGACCACTGC GCTGGACGTG ACCGTTCAGC TGAAAATCCT CGACCTGCTC AAGGAATTGC AGGCCCGATT AGGCATGGCG CTGTTACTGA TCAGTCACGA TTTGAACCTC GTGCGAAGAA TTGCGCATCG TGTATGTGTC ATGCAGCGCG GTTGCATCGT CGAACAGGCA TCGTGCGAAG AGCTGTTCCG TTCGCCGCAG CATCCGTACA CTCGGGAACT GCTTGGCGCA GAGCCCAGCG GAGGCCCGGC GAGCAATAAA ATCGGGGCGC CGCTGCTTGA AGTCGAGGAT CTGAAAGTCT GGTTCCCGAT CAAGAAAGGC CTGCTCAAGC GCACGGTGGA TCACGTCAAG GCAGTGGACG GCATCAATTT CAGCCTGCCT CAGGGTCAGA CCCTGGGGAT CGTGGGGGAA AGCGGTTCCG GCAAATCCAC CCTGGGTCTG GCGATCCTGC GGTTGATCGG CAGCAAAGGT GCGATCCGTT TTGAAGGCAA GCAGCTAGAC TGCCTGACGC AAAGCGAAGT CCGGCCGTTG CGCCGGGAGA TGCAGGTGGT GTTTCAGGAT CCGTTTGGCA GCCTGAGCCC GCGAATGTGC GTGAATGACA TCGTTGGTGA AGGCCTGCGG ATCCACAAGA TGGGCACCGC TGCCGAGCAG GAAGCGGCGA TTATTGCGGC ATTGAAGGAG GTAGGTCTGG ATCCGGAAAC CCGGCACCGC TACCCCCACG AATTTTCCGG TGGGCAACGG CAGCGAATTG CCATAGCCCG GGCCTTGGTG CTCAAACCGG CGCTGATCCT GCTGGACGAG CCGACTTCGG CCCTCGACCG GACGGTGCAG CGGCAAGTGG TGGAGCTGTT GCGCTCACTG CAAGCCAAGT ACAACCTGAC GTATTTGTTC ATCAGCCATG ACCTGGCTGT CGTCAAAGCG CTGAGCCACC AGCTGATGGT GGTCAAGCAT GGCCAAGTGG TCGAACAGGG AGACGCGCAA AGTATCTTTG CCGCCCCCCA ACATTCGTAT ACACAGCAGT TGCTGGAGGC CGCTTTCCTG GCACCAGCCA CTGCGCAATA A
|
Protein sequence | MNQDNLIEIR DLAVEFGFGE RVHRVVEGVS FDIKRGETLA LVGESGSGKS VTAHSILRLL PYPLARHPAG SINYSGQNLL ELGEKTIRHI RGNRIAMIFQ EPMTSLNPLH SIEKQINEVL GIHKGLTGKV ATKRTLELLE MVGIPEPHKR LKALPHELSG GQRQRVMIAM ALANEPELLI ADEPTTALDV TVQLKILDLL KELQARLGMA LLLISHDLNL VRRIAHRVCV MQRGCIVEQA SCEELFRSPQ HPYTRELLGA EPSGGPASNK IGAPLLEVED LKVWFPIKKG LLKRTVDHVK AVDGINFSLP QGQTLGIVGE SGSGKSTLGL AILRLIGSKG AIRFEGKQLD CLTQSEVRPL RREMQVVFQD PFGSLSPRMC VNDIVGEGLR IHKMGTAAEQ EAAIIAALKE VGLDPETRHR YPHEFSGGQR QRIAIARALV LKPALILLDE PTSALDRTVQ RQVVELLRSL QAKYNLTYLF ISHDLAVVKA LSHQLMVVKH GQVVEQGDAQ SIFAAPQHSY TQQLLEAAFL APATAQ
|
| |