Gene Pfl01_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2178 
Symbol 
ID3715758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2459275 
End bp2460885 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content60% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_347910 
Protein GI77458405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGG ACAATCTGAT CGAAATCCGC GACCTGGCCG TCGAATTCGG TTTCGGCGAG 
CGTGTGCACC GGGTCGTGGA AGGCGTGAGT TTCGACATCA AGCGCGGTGA AACCCTCGCG
TTGGTCGGCG AATCCGGCTC GGGCAAATCG GTGACCGCGC ACTCGATCCT GCGCTTGCTG
CCCTACCCGC TGGCGCGGCA TCCGGCCGGC AGCATCAATT ATTCCGGGCA GAACCTGCTG
GAACTGGGCG AAAAGACCAT CCGTCACATT CGCGGCAACC GGATCGCGAT GATCTTTCAG
GAGCCGATGA CCTCGCTCAA CCCGCTGCAC TCGATCGAGA AGCAGATCAA CGAGGTGCTG
GGTATCCACA AGGGCCTGAC CGGCAAAGTC GCGACCAAGC GCACGCTGGA GTTGCTGGAG
ATGGTCGGCA TCCCCGAGCC GCACAAGCGC CTCAAGGCCC TGCCCCACGA ATTGTCCGGC
GGCCAGCGTC AGCGGGTGAT GATCGCCATG GCCCTGGCCA ACGAGCCGGA ACTGCTGATC
GCCGACGAAC CGACCACTGC GCTGGACGTG ACCGTTCAGC TGAAAATCCT CGACCTGCTC
AAGGAATTGC AGGCCCGATT AGGCATGGCG CTGTTACTGA TCAGTCACGA TTTGAACCTC
GTGCGAAGAA TTGCGCATCG TGTATGTGTC ATGCAGCGCG GTTGCATCGT CGAACAGGCA
TCGTGCGAAG AGCTGTTCCG TTCGCCGCAG CATCCGTACA CTCGGGAACT GCTTGGCGCA
GAGCCCAGCG GAGGCCCGGC GAGCAATAAA ATCGGGGCGC CGCTGCTTGA AGTCGAGGAT
CTGAAAGTCT GGTTCCCGAT CAAGAAAGGC CTGCTCAAGC GCACGGTGGA TCACGTCAAG
GCAGTGGACG GCATCAATTT CAGCCTGCCT CAGGGTCAGA CCCTGGGGAT CGTGGGGGAA
AGCGGTTCCG GCAAATCCAC CCTGGGTCTG GCGATCCTGC GGTTGATCGG CAGCAAAGGT
GCGATCCGTT TTGAAGGCAA GCAGCTAGAC TGCCTGACGC AAAGCGAAGT CCGGCCGTTG
CGCCGGGAGA TGCAGGTGGT GTTTCAGGAT CCGTTTGGCA GCCTGAGCCC GCGAATGTGC
GTGAATGACA TCGTTGGTGA AGGCCTGCGG ATCCACAAGA TGGGCACCGC TGCCGAGCAG
GAAGCGGCGA TTATTGCGGC ATTGAAGGAG GTAGGTCTGG ATCCGGAAAC CCGGCACCGC
TACCCCCACG AATTTTCCGG TGGGCAACGG CAGCGAATTG CCATAGCCCG GGCCTTGGTG
CTCAAACCGG CGCTGATCCT GCTGGACGAG CCGACTTCGG CCCTCGACCG GACGGTGCAG
CGGCAAGTGG TGGAGCTGTT GCGCTCACTG CAAGCCAAGT ACAACCTGAC GTATTTGTTC
ATCAGCCATG ACCTGGCTGT CGTCAAAGCG CTGAGCCACC AGCTGATGGT GGTCAAGCAT
GGCCAAGTGG TCGAACAGGG AGACGCGCAA AGTATCTTTG CCGCCCCCCA ACATTCGTAT
ACACAGCAGT TGCTGGAGGC CGCTTTCCTG GCACCAGCCA CTGCGCAATA A
 
Protein sequence
MNQDNLIEIR DLAVEFGFGE RVHRVVEGVS FDIKRGETLA LVGESGSGKS VTAHSILRLL 
PYPLARHPAG SINYSGQNLL ELGEKTIRHI RGNRIAMIFQ EPMTSLNPLH SIEKQINEVL
GIHKGLTGKV ATKRTLELLE MVGIPEPHKR LKALPHELSG GQRQRVMIAM ALANEPELLI
ADEPTTALDV TVQLKILDLL KELQARLGMA LLLISHDLNL VRRIAHRVCV MQRGCIVEQA
SCEELFRSPQ HPYTRELLGA EPSGGPASNK IGAPLLEVED LKVWFPIKKG LLKRTVDHVK
AVDGINFSLP QGQTLGIVGE SGSGKSTLGL AILRLIGSKG AIRFEGKQLD CLTQSEVRPL
RREMQVVFQD PFGSLSPRMC VNDIVGEGLR IHKMGTAAEQ EAAIIAALKE VGLDPETRHR
YPHEFSGGQR QRIAIARALV LKPALILLDE PTSALDRTVQ RQVVELLRSL QAKYNLTYLF
ISHDLAVVKA LSHQLMVVKH GQVVEQGDAQ SIFAAPQHSY TQQLLEAAFL APATAQ