Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2176 |
Symbol | |
ID | 3715756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2457383 |
End bp | 2458348 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | diguanylate cyclase with GAF sensor |
Protein accession | YP_347908 |
Protein GI | 77458403 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.59733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTAC CCGGCAAACC TGCCAATGAA GCTGTCCGTA TTCAAGCGTT GCAGGATCTG AAGCTGCTCG ACACCGCACC GGAGGAGCGC TTCGACCGGC TGACGCGACT GGCCAAGCGT CTGTTCAACG TGCCGATCGC ACTGGTCACG CTGGTGGATA AGGAGCGGCA ATGGTTCAAG TCCTGCGTGG GTCTGGACAC GACCGAAACG CCACGCTCTG TTTCATTCTG TGCCCATGCG ATTCTCAGGG ACGAGCTTAT GCTGGTACCT GACGCCCGAG AGGACGAGCG TTTCCACGAC AACCCTTTGG TTACCGGGGA ACCGAACATC CGGTTCTACG CCGGTTATCC GCTGACCGTA CCCAGCGGCA ACAAGATGGG CACCTTGTGC CTGATCGACA CCAAACCCCG CGATCTCGAC GAAGAGGAGC GCGCCCTGCT GCGCGATCTG GCGGGCATGG CCGAGCAGGA ACTGATGGCC GTGCAGATGG CGAGCATGGA CGAGCTGACG CTGCTGTCCA ACCGTCGCGG TTTCAAGATG CTGGCCCAGC ATGCGCTCGA TGCCTGCGCA CGGCTGGAAA AACCGGCAAC GCTGCTGTTT TTCGACCTCA ATGATTTCAA GCAGATCAAC GATCTTTATG GGCACGCCGA GGGCGACAGC GCGCTCAAGA CCTTCGCCGA TGTGCTGCGC ATCGCCTTTC GCGAGAGCGA TGTGGTGGGA CGGCTGGGCG GCGATGAGTT TGTGGCGCTG TTGACCGGCT CAAGCCACGT CGAAACCACG GCGATCATGG CGCGACTCAA GGAAATCCTC GAAGAACGCA ATGCCACGTT GCACCGGGGT TACGCGATTC GCTTCAGCGT CGGCCAGATC GAATACAACC CGCAGCGCCA TGAGTCCGTG GATAAGCTGC TGGCGGATGC GGATGCAGCG ATGTATGAGC ACAAGCAGGC GTTGAAGCGT TGTTAG
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Protein sequence | MLVPGKPANE AVRIQALQDL KLLDTAPEER FDRLTRLAKR LFNVPIALVT LVDKERQWFK SCVGLDTTET PRSVSFCAHA ILRDELMLVP DAREDERFHD NPLVTGEPNI RFYAGYPLTV PSGNKMGTLC LIDTKPRDLD EEERALLRDL AGMAEQELMA VQMASMDELT LLSNRRGFKM LAQHALDACA RLEKPATLLF FDLNDFKQIN DLYGHAEGDS ALKTFADVLR IAFRESDVVG RLGGDEFVAL LTGSSHVETT AIMARLKEIL EERNATLHRG YAIRFSVGQI EYNPQRHESV DKLLADADAA MYEHKQALKR C
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