Gene Pfl01_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2176 
Symbol 
ID3715756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2457383 
End bp2458348 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID 
Productdiguanylate cyclase with GAF sensor 
Protein accessionYP_347908 
Protein GI77458403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.59733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTAC CCGGCAAACC TGCCAATGAA GCTGTCCGTA TTCAAGCGTT GCAGGATCTG 
AAGCTGCTCG ACACCGCACC GGAGGAGCGC TTCGACCGGC TGACGCGACT GGCCAAGCGT
CTGTTCAACG TGCCGATCGC ACTGGTCACG CTGGTGGATA AGGAGCGGCA ATGGTTCAAG
TCCTGCGTGG GTCTGGACAC GACCGAAACG CCACGCTCTG TTTCATTCTG TGCCCATGCG
ATTCTCAGGG ACGAGCTTAT GCTGGTACCT GACGCCCGAG AGGACGAGCG TTTCCACGAC
AACCCTTTGG TTACCGGGGA ACCGAACATC CGGTTCTACG CCGGTTATCC GCTGACCGTA
CCCAGCGGCA ACAAGATGGG CACCTTGTGC CTGATCGACA CCAAACCCCG CGATCTCGAC
GAAGAGGAGC GCGCCCTGCT GCGCGATCTG GCGGGCATGG CCGAGCAGGA ACTGATGGCC
GTGCAGATGG CGAGCATGGA CGAGCTGACG CTGCTGTCCA ACCGTCGCGG TTTCAAGATG
CTGGCCCAGC ATGCGCTCGA TGCCTGCGCA CGGCTGGAAA AACCGGCAAC GCTGCTGTTT
TTCGACCTCA ATGATTTCAA GCAGATCAAC GATCTTTATG GGCACGCCGA GGGCGACAGC
GCGCTCAAGA CCTTCGCCGA TGTGCTGCGC ATCGCCTTTC GCGAGAGCGA TGTGGTGGGA
CGGCTGGGCG GCGATGAGTT TGTGGCGCTG TTGACCGGCT CAAGCCACGT CGAAACCACG
GCGATCATGG CGCGACTCAA GGAAATCCTC GAAGAACGCA ATGCCACGTT GCACCGGGGT
TACGCGATTC GCTTCAGCGT CGGCCAGATC GAATACAACC CGCAGCGCCA TGAGTCCGTG
GATAAGCTGC TGGCGGATGC GGATGCAGCG ATGTATGAGC ACAAGCAGGC GTTGAAGCGT
TGTTAG
 
Protein sequence
MLVPGKPANE AVRIQALQDL KLLDTAPEER FDRLTRLAKR LFNVPIALVT LVDKERQWFK 
SCVGLDTTET PRSVSFCAHA ILRDELMLVP DAREDERFHD NPLVTGEPNI RFYAGYPLTV
PSGNKMGTLC LIDTKPRDLD EEERALLRDL AGMAEQELMA VQMASMDELT LLSNRRGFKM
LAQHALDACA RLEKPATLLF FDLNDFKQIN DLYGHAEGDS ALKTFADVLR IAFRESDVVG
RLGGDEFVAL LTGSSHVETT AIMARLKEIL EERNATLHRG YAIRFSVGQI EYNPQRHESV
DKLLADADAA MYEHKQALKR C