Gene Pfl01_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2172 
Symbol 
ID3715752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2453035 
End bp2453865 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_347904 
Protein GI77458399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.779454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTTG TCACAACGAA AGACGGCGTC GAAATCTTCT ACAAGGACTG GGGCCCGAAA 
GACGCCCCGG TGATCCACTT CCACCACGGC TGGCCGCTCA GCGCGGACGA TTGGGATGCG
CAGATGCTGT TCTTCCTCGC CCAGGGCTTC CGGGTCGTGG CCCACGACCG GCGAGGTCAC
GGGCGTTCGA GCCAGGTCTG GGACGGCCAC GACATGGATC ACTACGCCGA CGACGTGGCG
GCGGTGGTCA ACCATCTGGG GACGCAGAAA GCCGTGCATG TCGGCCACTC CACCGGTGGC
GGCGAGGTGA TTCATTACAT CGCCCGGCAT GGCGAGGATC GGGTGTCGAA AGCCGCGATC
ATCAGTGCCG TGCCGCCGCT GATGGTGAAA ACCGAGAGCA GCCCCGGTGG CTTGCCCAAA
TCGGTGTTCG ACGATCTTCA GGCGCAACTG GCAGCCAATC GCGCGCAGTT CTATCGCGAC
GTGCCCAGTG GGCCGTTCTA CGGCTACAAC CGCCCTGGCG CCAAGCCATC GGAAGGGATC
ATTGCGAACT GGTGGCGCCA AGGCATGATC GGCAGCGCCA AGGCGCACTA CGACGGGATC
GTTGCCTTTT CCCAGACCGA CTTCACCGCT GACCTCAAAA GCATCTCGAT CCCGGTGCTG
GTGATGCACG GCGACGATGA CCAGATCGTG CCCTATGAAA ACGCCGGCGT GCTGTCGGCG
AAACTGCTGA AAAACAGCAC GCTGAAGATT TATCCGGGCT TCCCCCACGG GATGCCGACC
ACCGAGGCGC CGACGATCAA CGCGGATCTG CTGGCGTTCA TTCGCGGCTG A
 
Protein sequence
MGFVTTKDGV EIFYKDWGPK DAPVIHFHHG WPLSADDWDA QMLFFLAQGF RVVAHDRRGH 
GRSSQVWDGH DMDHYADDVA AVVNHLGTQK AVHVGHSTGG GEVIHYIARH GEDRVSKAAI
ISAVPPLMVK TESSPGGLPK SVFDDLQAQL AANRAQFYRD VPSGPFYGYN RPGAKPSEGI
IANWWRQGMI GSAKAHYDGI VAFSQTDFTA DLKSISIPVL VMHGDDDQIV PYENAGVLSA
KLLKNSTLKI YPGFPHGMPT TEAPTINADL LAFIRG