Gene Pfl01_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2163 
Symbol 
ID3715743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2445985 
End bp2446740 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID 
ProductThiJ/PfpI 
Protein accessionYP_347895 
Protein GI77458390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.843992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGA TTCTGCTGCC CAGCGCCGAT TACGACCCGA CCGAAAGCAG CGTGCCCTGG 
CAGGCGATGC GTAACGCGGG CATCGAAGTT CGTTTTGCCA CCCCGCAAGG TTTGCCCGCC
CACGCCGACC CACGGTTGGT GGACATCGGT TTCGGCCTGT TGAATTCGAT GCTGATGACA
CGCAAGGCCG ATCTGGACAG TTACACGCAG ATGATCGAGT CCGAAGCGTT CAGGCAGCCG
CTGGCGTATG CCGATGTCGA CACGAACCGC TTCGATGGTC TGCTGATCCC CGGCGGGCAT
GCCAAAGGAA TGCGCACGCT GTTGGAATCC ACGCAGGCCC AGCAGATTGC CCTGCAATTT
TTCAAGGCCG AAAAACCCGT GGCGGCGGTC TGTCATGGCG TGCTGTTGCT GGCGAGGACG
CTCGACCCCG ACACCGGGCG TTCGGTGTTG TTCGGGCGCA AGGTCACGGC GTTGCTCGCG
GCAACCATGG AATTGCCGGC GTGGCTGATG ACAGCTGCGT GGCTGGGGCG CTACTACCGC
ACCTACAAGC AGACCGTTGA AGCGGAGGTG AAAACCGCGC TGGCCCACAA AGCCGACTTC
AAACGCGGAC CGCTGATCGC CAAACGCGAT TGTGCGCAGA AACTGCAATC AGGATTTGTG
GTGCGCGACG GCCAACTGCT GACGGCGCGC TGGCCCGGCG ACTGCCATCG ATTCGCCGCA
GAATGGGTGG CCATGTTGCA GGCCCCCCAA CGCTGA
 
Protein sequence
MILILLPSAD YDPTESSVPW QAMRNAGIEV RFATPQGLPA HADPRLVDIG FGLLNSMLMT 
RKADLDSYTQ MIESEAFRQP LAYADVDTNR FDGLLIPGGH AKGMRTLLES TQAQQIALQF
FKAEKPVAAV CHGVLLLART LDPDTGRSVL FGRKVTALLA ATMELPAWLM TAAWLGRYYR
TYKQTVEAEV KTALAHKADF KRGPLIAKRD CAQKLQSGFV VRDGQLLTAR WPGDCHRFAA
EWVAMLQAPQ R