| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2134 |
|---|
| Symbol | |
|---|
| ID | 3715870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2417980 |
|---|
| End bp | 2418999 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | putative ammonia monooxygenase |
|---|
| Protein accession | YP_347866 |
|---|
| Protein GI | 77458361 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCA TTCTGTGTTT GTTGATTGCT GCCGGCTTCG GCGCGCTGTT GCAGTTCGAA
GGCGTGCCCC ACGGTTTACT GCTGGGCTCG ATTCTTGTCA CCGCACTTGT CGTCACTAAA
TTTGGCATCG CACCGGCGAC GCCTTATGGT CTGGGTTACA TCCAGGTCAC GCTGGGTATC
GCCACCGGGT TGATGTTCGA AGCGTGGGAC AGCGCGACGG TCTCGACGAT GTTGCCAAGC
CTCGGCGTAT TGCTGCTGTG CCTGGCAGTG CAAGTGGCGC TGGCCGCCTG GTGGCTGTCG
CGCGGGGCAG GGTGGAATCG CACGGATGCC TTGTTGGCCG TTTATCCGGG TGCGCTGGCG
GCGGTGTTCG ATTTGCTGGA ATCGCATCAG GCGTCGAGCA AGGTGATCAT CGTGCACTTG
ATGCGGCTGC TGCTGATCAC GGTGCTGGTG AGTTTGCTGA TTCCCGGAAC GGCACCGGTT
GCCGTGACCG AAATTGATCC CTTGTCCACG GGCATGGCGT TGACCGTGCT GGCAGTGATC
GGTTTGAGCG TGGTGGTCGG GCGTTTGCTG CTGGCCGTTG GCGTGCCGGC GCCGTTCATG
TTGACGGCAA TCATCATCAC CGCCGTATTC GTGAAATCAG GATGGCTGCA GGGCTTTCAC
ATGCCGGATT GGAGCCTGAA TCTGGCGGCG CTGATTCTGG GTGTGCGGAT CGGTTCGCGA
TTCCAGGGAT TGGGCCTCGC GGAACTGGGA CGTCATGGCC GCACGGCGCT GGTGTCGGTG
GGTTTGATGA TTCTGGTCGC GGCGGTTTTT GCATTGGCGG CGGCACGGTT GCTGGGCAGC
GATGCGTTGT CGCTCTGGCT GGCCTACATG CCGGGGGCCA TCGAAACCAT CGCGATTGTG
GCGTTCGCCG GCGGGCTGAA TGTGGTGTTT ATCCTAACTC ACCATCTGGC GCGGATGGTG
GTGTTGCACT TTGCGCCGGC GTTGTTCGTG CAGGTTCGGC GGGTGAGAGA AGGGGTGTGA
|
|---|
| Protein sequence | MKSILCLLIA AGFGALLQFE GVPHGLLLGS ILVTALVVTK FGIAPATPYG LGYIQVTLGI
ATGLMFEAWD SATVSTMLPS LGVLLLCLAV QVALAAWWLS RGAGWNRTDA LLAVYPGALA
AVFDLLESHQ ASSKVIIVHL MRLLLITVLV SLLIPGTAPV AVTEIDPLST GMALTVLAVI
GLSVVVGRLL LAVGVPAPFM LTAIIITAVF VKSGWLQGFH MPDWSLNLAA LILGVRIGSR
FQGLGLAELG RHGRTALVSV GLMILVAAVF ALAAARLLGS DALSLWLAYM PGAIETIAIV
AFAGGLNVVF ILTHHLARMV VLHFAPALFV QVRRVREGV
|
|---|
| |