Gene Pfl01_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2130 
Symbol 
ID3715866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2415712 
End bp2416113 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content50% 
IMG OID 
ProductISPsy11, transposase OrfA 
Protein accessionYP_347862 
Protein GI77458357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.851639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG GAAAAAGGCG CAGTCAGCGT GATTACACGC GGACCTTTAA ATTGTCGGTC 
GTCGATCAGG TCGAAAAAGG CGAGTTGAGT TATAAAGAGG CTCAAGAGCG TTATGGCATT
CAGGGTAAAT CGACCGTACT GAACTGGTTA CGCAGGCATG GTCGGCAGGA CTGGAGTCAA
GGCGCGTCCA TTCGCTCCAA GAGACCCCGT TCCATGGATG AGCCCGATAA ACCACTGACA
CCCGAACAGC GAATCAAAGA GCTCGAAGAA AAGCTGGCCC AAGCCAACCA GAAAGCTCAG
TTTTTCGAAG CTGTCGTTGA TGTTTTAAAG AACGACTTCG GTGTTTCTGT CGTAAAAAAG
CGATCCGGCA AGTCCTCTCC CAAGGGCAGA TCCAAGACCT GA
 
Protein sequence
MNTGKRRSQR DYTRTFKLSV VDQVEKGELS YKEAQERYGI QGKSTVLNWL RRHGRQDWSQ 
GASIRSKRPR SMDEPDKPLT PEQRIKELEE KLAQANQKAQ FFEAVVDVLK NDFGVSVVKK
RSGKSSPKGR SKT