Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2125 |
Symbol | |
ID | 3715861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2412384 |
End bp | 2412932 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_347857 |
Protein GI | 77458352 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.318777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGG GTTCTCGACT CAAACTAGTA CGCGAAAGCT ACAAACTCTC CCAGCGCGAG CTGGCCCGGC GTAGCGGCGT GACCAATGCC ACCATCTCCC TGATCGAACA GAATCGTGTC AGTCCTTCCG TCAGCTCACT GAAAAAGCTG CTCGAAGGCA TCCCGATGTC CCTGGCCGAC TTCTTCACCT TCGACCAGCC GCCCCGCGAA CACCAATACG TCTTCCGCGC CAACGAACAA CCCGACCTCG GCCGCCACGG CCTGCGCCTG CTGCTGATCG GCGCCTCGGT CCCCAGCCGC CAGATGCGCT TGCTGCGCGA GCAATACGCA CCGGGCGCGA GTTCCGGGGA AGAGCCGATT GTTCACGCGG AAGGTGAGGA GTGTGGGTTG GTGACGCGCG GCACCGTGGA GTTGACGGTG GACGGGCAGG TGAGTGTGTT GAGTGCGGGG GATGGGTATT ACTTCCCGAC GACGCTTCCG CACAAGTTCC GGAATATCGG GGCGGATGAG GCGGAGATTA TTAGTGCGAA TACGCCGGCG AATTTTTAG
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Protein sequence | MDTGSRLKLV RESYKLSQRE LARRSGVTNA TISLIEQNRV SPSVSSLKKL LEGIPMSLAD FFTFDQPPRE HQYVFRANEQ PDLGRHGLRL LLIGASVPSR QMRLLREQYA PGASSGEEPI VHAEGEECGL VTRGTVELTV DGQVSVLSAG DGYYFPTTLP HKFRNIGADE AEIISANTPA NF
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