Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2104 |
Symbol | |
ID | 3715899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2391033 |
End bp | 2391899 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Allergen V5/Tpx-1-like |
Protein accession | YP_347836 |
Protein GI | 77458331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.233408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.634912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCACG CCGTACGTTC GTCTCGCTTC GTTTCGCTGT GCCTGTTGAT CCTTTCTCCC CTGTTTTCTC TCTCTGCCCA CGCCGGCGCC GAGCGGCAAC TGGTGGCCGC CATCAACGAC TACCGCGCCC ATCCGCAACG TTGTGACCGG CGCCCGGCCC AACGGCTGGC GCCGCTGACG CTGAAGTCGA ATCTGGCGTT GCCGGTCGGC TATGGCTACG GCGGTGGATT GCGCGAACGA TTGAAAGACT CCGGCTATGC CGCCGTGGCG GTGCGCAGCA TCCGAATCGT CGGCGCACAG GACGCCGAAG AGGCGTTCGA AATGCTGCAA GACGATTACT GCGGCGCGTT GCTCGACGGT CAATACGCCG ACATCGGCAT CAGCCGTGCC CGCAGCGAAT GGCAAGTGGT GCTGGCCCGG CCGGTGCTCG ACAGCCGCGT CGGCGACAAC CGCAGCGTCG GCAAGGCCTT GCTGGCCGAG GTCAATGCCG CCCGCGCCCG CCCGCGCATG TGTGGTCGCC AGCGCTTCGC CGCCGCCCGG CCCTTGAGCT GGAACCCGGC GCTCGGCGCC GCCGCTCAGG GCCACAGCAA GGCCATGGCC TACGGCAACT ATTTCGCTCA CCGCGACCCG GACGGCGACG GCCCGGCAGA TCGCGCACGT GCAGCCGGCT ACCGTGGCCG GCAGATCGGC GAAAACATCG CCGCCGGACA AAGCTCACCG GGCAAGGCCA TGGCCGGCTG GCTGGCCAGC CCCGGACACT GCGCCAACCT GATGAACCCG ATGTTCACCC AGGTCGGCGC GGGGTTTGCC AGTGAGGCGC GCAGTGATGA AGGGGTTTAC TGGACGATGC TGTTCGGGGC GCCCTGA
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Protein sequence | MRHAVRSSRF VSLCLLILSP LFSLSAHAGA ERQLVAAIND YRAHPQRCDR RPAQRLAPLT LKSNLALPVG YGYGGGLRER LKDSGYAAVA VRSIRIVGAQ DAEEAFEMLQ DDYCGALLDG QYADIGISRA RSEWQVVLAR PVLDSRVGDN RSVGKALLAE VNAARARPRM CGRQRFAAAR PLSWNPALGA AAQGHSKAMA YGNYFAHRDP DGDGPADRAR AAGYRGRQIG ENIAAGQSSP GKAMAGWLAS PGHCANLMNP MFTQVGAGFA SEARSDEGVY WTMLFGAP
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