Gene Pfl01_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2104 
Symbol 
ID3715899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2391033 
End bp2391899 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content68% 
IMG OID 
ProductAllergen V5/Tpx-1-like 
Protein accessionYP_347836 
Protein GI77458331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.233408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.634912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACG CCGTACGTTC GTCTCGCTTC GTTTCGCTGT GCCTGTTGAT CCTTTCTCCC 
CTGTTTTCTC TCTCTGCCCA CGCCGGCGCC GAGCGGCAAC TGGTGGCCGC CATCAACGAC
TACCGCGCCC ATCCGCAACG TTGTGACCGG CGCCCGGCCC AACGGCTGGC GCCGCTGACG
CTGAAGTCGA ATCTGGCGTT GCCGGTCGGC TATGGCTACG GCGGTGGATT GCGCGAACGA
TTGAAAGACT CCGGCTATGC CGCCGTGGCG GTGCGCAGCA TCCGAATCGT CGGCGCACAG
GACGCCGAAG AGGCGTTCGA AATGCTGCAA GACGATTACT GCGGCGCGTT GCTCGACGGT
CAATACGCCG ACATCGGCAT CAGCCGTGCC CGCAGCGAAT GGCAAGTGGT GCTGGCCCGG
CCGGTGCTCG ACAGCCGCGT CGGCGACAAC CGCAGCGTCG GCAAGGCCTT GCTGGCCGAG
GTCAATGCCG CCCGCGCCCG CCCGCGCATG TGTGGTCGCC AGCGCTTCGC CGCCGCCCGG
CCCTTGAGCT GGAACCCGGC GCTCGGCGCC GCCGCTCAGG GCCACAGCAA GGCCATGGCC
TACGGCAACT ATTTCGCTCA CCGCGACCCG GACGGCGACG GCCCGGCAGA TCGCGCACGT
GCAGCCGGCT ACCGTGGCCG GCAGATCGGC GAAAACATCG CCGCCGGACA AAGCTCACCG
GGCAAGGCCA TGGCCGGCTG GCTGGCCAGC CCCGGACACT GCGCCAACCT GATGAACCCG
ATGTTCACCC AGGTCGGCGC GGGGTTTGCC AGTGAGGCGC GCAGTGATGA AGGGGTTTAC
TGGACGATGC TGTTCGGGGC GCCCTGA
 
Protein sequence
MRHAVRSSRF VSLCLLILSP LFSLSAHAGA ERQLVAAIND YRAHPQRCDR RPAQRLAPLT 
LKSNLALPVG YGYGGGLRER LKDSGYAAVA VRSIRIVGAQ DAEEAFEMLQ DDYCGALLDG
QYADIGISRA RSEWQVVLAR PVLDSRVGDN RSVGKALLAE VNAARARPRM CGRQRFAAAR
PLSWNPALGA AAQGHSKAMA YGNYFAHRDP DGDGPADRAR AAGYRGRQIG ENIAAGQSSP
GKAMAGWLAS PGHCANLMNP MFTQVGAGFA SEARSDEGVY WTMLFGAP