Gene Pfl01_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2084 
Symbol 
ID3715977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2369671 
End bp2371851 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347816 
Protein GI77458311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGC TCGATTCTGT CACTCAAGCC TGTCGGCGGC TCGCGCCGGG CGGCTGGCAC 
TCGCTGATGC TGGCTCATGG TCTGGATATT CTCGCCGTAC CGCTCAAGGA CGAACTGCTC
AAACCATTGC GTATCGACCG GTCGCTTCCC GGTTTTGAAG ACTTTGGCCC GGCCGGCGAT
CGGGCGATCG AACCTGCCCG GCCTGCTCAA AGCCTGCTCT TCCATGCGCT GGCGTCGCCG
AGGGTCACGC GCGATGCAAG TGGTCAGCCC CTGCAAACCT ATCCAACCCC TGTCGAGATC
CGGGCTGTTC TGAACTACGT CTTCGGCGTC CGTCCACCCT CGCTCAAGGA TTTGCAGCGA
AAGGCCCAGG GCGAACCGCT GGCCGTGGCA GTGTTTGCCA GCGAGTACCG TTGCGCCGCC
GATACGGTGC ATGGTGAGCA CGCCGATCTG TGTTACTCGC GCAGCGGTAT TGCGCGTGTG
GGCAATACCA GCGCCCTGTA CGCCCCCGAG CTGCGCTGCT TCTTGCCGTT CGTTCAGGAC
GACCCCTACG GCATTCGCAT AATGCCGGTG CATTACAGCG CCTATATCGC CGTGCAACGC
CAAGGAAATC ACGAACAGTT CGGCCCGATG GATGCTCAGC CGGACGTCGA TCCCGCACTG
AAATTCTGGG TGCCGATGCA CAAGCTGTTC GATGGCAAGG AATGCCTTGC GGGACTGGAT
CTGGAGGTGA AATTCAAAGC TTTTCATATC AATGAAAAGA TTCGCCACAT CCATCTGCGT
CACAGCGACA CCGGCTGGCA AGAACCGGAT ATTTCCCAAT ACCCCTTTGT CATCACCGAT
GGTCTGGCAA CGCTGGAGGT GGAGCGCGGA TCGGGGTCGA GTCTACTGCT GCCCCGGCCC
AGACCCCGGC TCGCCGAGCA GGCCCATTAC CGGGGCCAGT TGTTGTCATT CACGATGCCC
AGGGACTCGG GAGGCATGAT CCACGGTCGG TCAATGCTGC ACGACAATGG CACCATCGAA
GATCTGAACC ACCGCGAGGG TGTCGCCGAG CTGGTGAAGC AAGGCGGCTA TCGCGCCCTG
CACTATCGGG ACGGCACGGC CGACGGCTAC ATCCGCGCGC ACTGCACGTC GCTGGGGCAT
CTGCAGTCGA TACCTGCCTA TTCGATCATT GCCCCCGCGG ATTTCTTACC GTCTTGCCAC
CCACGGCGCC TGATGCACTG GGCCAGCCAG GTGCCAGCCT TCACCGGCTC AAGCATCTGG
CATGCCCGAC TGCAGGCGTT ATCGAATGTG CGTTATTGCG CCAACCTGAC ACTCGCGGGT
CAGCCGTTCT CCCCGGAGGA TCGGGGAGTC ACCGCGATTG TCGGTTTGCC GCGCAAGTCG
GTCTCATGGC CGCTGACCGG CACACGCCCT GTCGGCATCG ACCGTCCTTC CACATTGCCG
GACGGCGAAG CCGGACTTTT CGCCCCGGGT TGGGGGGTAG GCCGAGTGCG TGAGCAAAGC
CCGGACGGTA GCTGGATCGA CCATCTCGCC GGTTACCAGA TGGCCAGTCC TTTTCCCGAG
GACGCCAGAA TCTGCGCAGC ACTGGGCTCT TTCTGGCCAG GCCTGGCACC CGACTCCGCG
AGCACTTTCG AGCCCCGCTC CAGCCTGCAC ACCATTATCC CGTTGACCGA TGCGGAAACC
GGAAGAAGCG CCGTCGCCTG GGACAACCAA CCACCCGCGC AGCTGATCCA GCATCAGGGT
CGGACGTTCG TCCGCTATCG CGCCTACGAA TACAGCGATT ACACACAAGT CGCCCTTGAA
AACAGATTCT GCCTGCAGCA GACCGGCGCA ATCACCCAGC AGGAATATCA AGACCGGGTG
CTCTCGATGT ACCGCGTGTA CAACGTACTC GGTGCGGGAA CCGACAAGGC CTTGCGTAAT
ACGTGGCCGT TGCTGTCCTT CATCCAGGTG CAGCGACCCG ATCCGGAATT GGAATCGGCG
CAACAGCAGG TCGGCATCGT GTTGCGCGGT TGGGTCTTTC GCTTCCTGAT GTACGAACGC
GGCGTCATGA GCATCCCTGC TGAAGACTTC AAATGGAGGG ATGTGCAAGT CAAACAACAA
GTGCGACTGT TCGTCAGCGC CGAAACGATA CTGGTCAAAT ACGAAAATGC TGCGTGGCAA
CTCGCCCTTG AAGCCCTTTG A
 
Protein sequence
MSLLDSVTQA CRRLAPGGWH SLMLAHGLDI LAVPLKDELL KPLRIDRSLP GFEDFGPAGD 
RAIEPARPAQ SLLFHALASP RVTRDASGQP LQTYPTPVEI RAVLNYVFGV RPPSLKDLQR
KAQGEPLAVA VFASEYRCAA DTVHGEHADL CYSRSGIARV GNTSALYAPE LRCFLPFVQD
DPYGIRIMPV HYSAYIAVQR QGNHEQFGPM DAQPDVDPAL KFWVPMHKLF DGKECLAGLD
LEVKFKAFHI NEKIRHIHLR HSDTGWQEPD ISQYPFVITD GLATLEVERG SGSSLLLPRP
RPRLAEQAHY RGQLLSFTMP RDSGGMIHGR SMLHDNGTIE DLNHREGVAE LVKQGGYRAL
HYRDGTADGY IRAHCTSLGH LQSIPAYSII APADFLPSCH PRRLMHWASQ VPAFTGSSIW
HARLQALSNV RYCANLTLAG QPFSPEDRGV TAIVGLPRKS VSWPLTGTRP VGIDRPSTLP
DGEAGLFAPG WGVGRVREQS PDGSWIDHLA GYQMASPFPE DARICAALGS FWPGLAPDSA
STFEPRSSLH TIIPLTDAET GRSAVAWDNQ PPAQLIQHQG RTFVRYRAYE YSDYTQVALE
NRFCLQQTGA ITQQEYQDRV LSMYRVYNVL GAGTDKALRN TWPLLSFIQV QRPDPELESA
QQQVGIVLRG WVFRFLMYER GVMSIPAEDF KWRDVQVKQQ VRLFVSAETI LVKYENAAWQ
LALEAL