Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2046 |
Symbol | |
ID | 3716056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2331826 |
End bp | 2333202 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347778 |
Protein GI | 77458273 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTGC AGCCTTTCGT CAGCCCCGAC CTGATCCGCC AACGCTTCTC CAAAGCGATG TCCGACATGT ACCGCGAAGA AGTGCCGCTG TACGGCGCGT TGATGGAATT GGTGGAACAG ACCAACCGCG ACGTGCTGGC ACGCGAACCG CAGATCGCCA GCCAACTGCA CAGCACTGGC GAAATCGAAC GGCTGGACAT GGAGCGCCAC GGTGCCATCC GCGTCGGCAC CGCCGCAGAG CTCGCCACCC TCGCCCGCCT GTTTGCGGTG ATGGGCATGC AACCGGTGGG CTATTACGAC CTGACCCCTG CCGGGGTGCC GGTGCACTCC ACGGCGTTCC GGGCGGTGCA TGAAGATGCG CTGCAGGTCA GTCCGTTCCG GGTGTTCACT TCGTTGCTGC GACTGGAATT GATTGAAGAC CCCGAGCTGC GGGCCTTTGC TGAATCGGTG CTGGATAAGC GTTCGATCTT TACGCCATCG GCGCTAAGGT TGATCGAACA GGCCGAATCG GCTGGCGGTC TGAATGAATC CGAGGCCGGG GAATTTGTCC TGCAAGCGCT GGAGACTTTT CGCTGGCACC ACAGCGCCAC CGTCACTGCC GCGCAATACC AGACGCTCAG CGCCCAGCAT CGCTTGATCG CCGATGTCGT GGCCTTCAAG GGCCCGCACA TCAACCACCT GACCCCGCGC ACGCTGGACA TCGACATCGT CCAGGCACAG ATGCCGCTGC ACGGCATCAC GCCCAAAGCG GTGATCGAAG GCCCGCCGCG CCGGCAGCAT CCGATCCTGT TGCGTCAGAC CAGTTTCAAG GCGCTGGACG AGCCGATCGC CTTCACCGAC CAGACACAAA CCCGCGGCAG CCACAGCGCC CGCTTCGGCG AAATCGAACA ACGTGGCGCA GCGCTGACCC CCAAGGGCCG TGCGTTGTAC GACCGCCTGC TGAACGCGGC GCGCGATGAA CTGGGCGATT TCCCCAACGA AGCCAACGCC TCACGTTACA ACGCGCTGAT GACCCAGCAT TTCAGCGAAT TCCCTGACAG CCTCGAGGGC ATGCGCGAGC AGGAACTGGC GTACTTCCGT TATTTCCTGA CAGGCAAAGT AGGTCGTCCC GCAGATGTAA CGCTGCAAGG ATTATTACGC GACGGCTATG TGAAAGCCGA ACCGCTGGTG TACGAAGATT TCCTGCCAGT CAGTGCGGCA GGGATTTTTC AGTCGAACCT GGGGGACGCG GCGCAGGCGC ACTATGGCGA ACATTCCAAT CGACAGGCGT TCGAGTTGGC CTTGGGGCGT TCGACCATTG ATGAGTTGGG CCTGTATGCC GAAACCCAGC AACGTTCGAT TGAGGAATGC CTCACTGCAA TTGCCCACTC CGCGTGA
|
Protein sequence | MTVQPFVSPD LIRQRFSKAM SDMYREEVPL YGALMELVEQ TNRDVLAREP QIASQLHSTG EIERLDMERH GAIRVGTAAE LATLARLFAV MGMQPVGYYD LTPAGVPVHS TAFRAVHEDA LQVSPFRVFT SLLRLELIED PELRAFAESV LDKRSIFTPS ALRLIEQAES AGGLNESEAG EFVLQALETF RWHHSATVTA AQYQTLSAQH RLIADVVAFK GPHINHLTPR TLDIDIVQAQ MPLHGITPKA VIEGPPRRQH PILLRQTSFK ALDEPIAFTD QTQTRGSHSA RFGEIEQRGA ALTPKGRALY DRLLNAARDE LGDFPNEANA SRYNALMTQH FSEFPDSLEG MREQELAYFR YFLTGKVGRP ADVTLQGLLR DGYVKAEPLV YEDFLPVSAA GIFQSNLGDA AQAHYGEHSN RQAFELALGR STIDELGLYA ETQQRSIEEC LTAIAHSA
|
| |