Gene Pfl01_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2046 
Symbol 
ID3716056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2331826 
End bp2333202 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347778 
Protein GI77458273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC AGCCTTTCGT CAGCCCCGAC CTGATCCGCC AACGCTTCTC CAAAGCGATG 
TCCGACATGT ACCGCGAAGA AGTGCCGCTG TACGGCGCGT TGATGGAATT GGTGGAACAG
ACCAACCGCG ACGTGCTGGC ACGCGAACCG CAGATCGCCA GCCAACTGCA CAGCACTGGC
GAAATCGAAC GGCTGGACAT GGAGCGCCAC GGTGCCATCC GCGTCGGCAC CGCCGCAGAG
CTCGCCACCC TCGCCCGCCT GTTTGCGGTG ATGGGCATGC AACCGGTGGG CTATTACGAC
CTGACCCCTG CCGGGGTGCC GGTGCACTCC ACGGCGTTCC GGGCGGTGCA TGAAGATGCG
CTGCAGGTCA GTCCGTTCCG GGTGTTCACT TCGTTGCTGC GACTGGAATT GATTGAAGAC
CCCGAGCTGC GGGCCTTTGC TGAATCGGTG CTGGATAAGC GTTCGATCTT TACGCCATCG
GCGCTAAGGT TGATCGAACA GGCCGAATCG GCTGGCGGTC TGAATGAATC CGAGGCCGGG
GAATTTGTCC TGCAAGCGCT GGAGACTTTT CGCTGGCACC ACAGCGCCAC CGTCACTGCC
GCGCAATACC AGACGCTCAG CGCCCAGCAT CGCTTGATCG CCGATGTCGT GGCCTTCAAG
GGCCCGCACA TCAACCACCT GACCCCGCGC ACGCTGGACA TCGACATCGT CCAGGCACAG
ATGCCGCTGC ACGGCATCAC GCCCAAAGCG GTGATCGAAG GCCCGCCGCG CCGGCAGCAT
CCGATCCTGT TGCGTCAGAC CAGTTTCAAG GCGCTGGACG AGCCGATCGC CTTCACCGAC
CAGACACAAA CCCGCGGCAG CCACAGCGCC CGCTTCGGCG AAATCGAACA ACGTGGCGCA
GCGCTGACCC CCAAGGGCCG TGCGTTGTAC GACCGCCTGC TGAACGCGGC GCGCGATGAA
CTGGGCGATT TCCCCAACGA AGCCAACGCC TCACGTTACA ACGCGCTGAT GACCCAGCAT
TTCAGCGAAT TCCCTGACAG CCTCGAGGGC ATGCGCGAGC AGGAACTGGC GTACTTCCGT
TATTTCCTGA CAGGCAAAGT AGGTCGTCCC GCAGATGTAA CGCTGCAAGG ATTATTACGC
GACGGCTATG TGAAAGCCGA ACCGCTGGTG TACGAAGATT TCCTGCCAGT CAGTGCGGCA
GGGATTTTTC AGTCGAACCT GGGGGACGCG GCGCAGGCGC ACTATGGCGA ACATTCCAAT
CGACAGGCGT TCGAGTTGGC CTTGGGGCGT TCGACCATTG ATGAGTTGGG CCTGTATGCC
GAAACCCAGC AACGTTCGAT TGAGGAATGC CTCACTGCAA TTGCCCACTC CGCGTGA
 
Protein sequence
MTVQPFVSPD LIRQRFSKAM SDMYREEVPL YGALMELVEQ TNRDVLAREP QIASQLHSTG 
EIERLDMERH GAIRVGTAAE LATLARLFAV MGMQPVGYYD LTPAGVPVHS TAFRAVHEDA
LQVSPFRVFT SLLRLELIED PELRAFAESV LDKRSIFTPS ALRLIEQAES AGGLNESEAG
EFVLQALETF RWHHSATVTA AQYQTLSAQH RLIADVVAFK GPHINHLTPR TLDIDIVQAQ
MPLHGITPKA VIEGPPRRQH PILLRQTSFK ALDEPIAFTD QTQTRGSHSA RFGEIEQRGA
ALTPKGRALY DRLLNAARDE LGDFPNEANA SRYNALMTQH FSEFPDSLEG MREQELAYFR
YFLTGKVGRP ADVTLQGLLR DGYVKAEPLV YEDFLPVSAA GIFQSNLGDA AQAHYGEHSN
RQAFELALGR STIDELGLYA ETQQRSIEEC LTAIAHSA