| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2044 |
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| Symbol | |
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| ID | 3716054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2328822 |
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| End bp | 2330864 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_347776 |
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| Protein GI | 77458271 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.909849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGC CGGCCAATGA AACCCATTTT GCCCTGACCA TCGAAGGTCT TTCCGCCGAC
TTTCAGGTGT TTACCCTGAC CGGCCGGGAA GCCATCAGCC AGCCTTTCGT ATTCGAGGTG
GAGCTGGTCA GTGAGCAGCC GTCGCTGGAC CTCGAAACCC TGCTGCACAA ACCGGCCTTC
CTGCAGCTGT CGCCCGACGG CAGCGGCATC CACGGCCTGA TCTACCGCGC CGCGCAAGGC
GATTCCGGCA AGCGCCTGAC GCGCTACTCC GTGACCCTGC GCCCGCAACT GGCGTACCTC
GCACACCGAA TCAACCAGCG GATCTTCCAG AACCTCAGCG TGCCGAAAAT CATCGGCAAG
GTCCTCGAAG AACACGGCAT CCAAGGCAAC GCCTATGCCT TCCAGACCGG CTCGATCTAC
CCCGAGCGCA TCTACTGCGT GCAATACGAC GAATCGGACC TGCATTTCAT CCAGCGCCTG
TGCGAAGAAG AAGGCATTCA CTACCACTTC CAGCACAGCG CCACGGGCCA CAAACTGGTG
TTCGGCGATG ACCAGACGGT GTTCAAGAAA CTGGCGCCGG TGGCCTATCA GCAGGACTCC
GGCATGGTCG CCAGCGACCC GGTGATCAAA CGCTTCGACC TGCGCCTGGA AACCCGCACC
AGCCGCACCA CCCGCCGCGA CTACGACTTC GAAAAACCGC GCCTGACGCT GGAAAGCGAA
AACCGCGGCG ACGCCCTGCC CGACCTCGAG GACTACGATT ACCCGGGCCG TTTCGTCGAC
CGCGAGCGCG GCAAGCACCT GGCCAAACGC GCCCTCGAAC GCCACCGCAG CGACTTCCAG
CTCGCCGAAG GCAAGAGCGA CCAGCCGTTG CTGGTCAGCG GCCATTTCCT CGCGCTGAAA
GAACACCCGA AGGCCAAGTG GAATGACCTG TGGCTGCTCA CCGAAGTCCA CCACGAAGGC
AAACAGCCGC AGGTGCTGGA AGAGTCGGTG ACCAGTGACA CCACCGCGCT CAAAGACGAT
TTCCATCAGG GCTACCGCAA CCGCTTCCAG GCCACCCCGT GGGACGTGCC GAACCGCCCG
CCCCTGCGCC ACCCGAAACC GCGCATCCTC GGCAGCCAGA GCGCCGTGGT CACCGGCCCT
AAAGGTGAAG AAATCCACTG CGACGAATAC GGCCGCGTCA AAGTCCAGTT CCACTGGGAC
CGCGACGGCC AGGCCGACGA CAAGACCAGT TGCTGGCTGC GCGTGTCTTC AGCCTGGGCC
GGCGCCCAGT ACGGCGGCAT CGCCATCCCG CGCATCGGCA TGGAAGTGCT GGTCACCTTC
CTCGAAGGCG ACCCCGACCA GCCGCTGATC AGCGGCTGCC TGTACCACAA GGAAAACACC
GTCCCGTACG CCCTGCCGGC GAATAAGACG CGCACCACCT TCAAGACCCT GAGCTCGATG
GGCGGCGGCG GCTTCAACGA ACTGCGCATC GAAGACAAGA AAGGTCAGGA ACAGATCTTC
CTGCACGCCC AGCGCGACTG GGACGAGAAC ATCGAACACG ACCAGAAAAT CCGCGTCGGC
AACGAACGCC ACGACGTCGT GGAAAAGAAC AGCTACACGG AATTCAAGGC CGAAGAACAC
CACACCGTTT ACGCAGACCG CAAAGTCGAA GCACGGGCCA ACGACCACCT GACCGTGGGC
GTGAACCAGC ACATCAAGAT TGGCACCGGG CAATTCATCG ACGCCGGCCA AGAAATTCAC
CTGAGCAGCG GAATGAAAGT GGTGCTGGAG GCTGGGGCCG AACTGACGCT GGTCGGCGGT
GGCAGCTTCA TCAAGATCGA TGGCGGCGGC GTGACCATGA GCGGGCCGGC GATCAACATC
AACTCCGGCG GCGGACCAGG CAGCGGCACG GGTGCCGCCC CGTTGATGCC GGGCGTGCTG
AAACAAGCAG ATGCCGACAA GGCGGGCGCC GTGCTGACGC CGGCGCAAAT CAACACCCTC
AAACGTAATG CGCCGTTCTG CGAAGAGTGT GAAAAATGCA AGGCAGGTGC CTGTGCCATC
TAA
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| Protein sequence | MFAPANETHF ALTIEGLSAD FQVFTLTGRE AISQPFVFEV ELVSEQPSLD LETLLHKPAF
LQLSPDGSGI HGLIYRAAQG DSGKRLTRYS VTLRPQLAYL AHRINQRIFQ NLSVPKIIGK
VLEEHGIQGN AYAFQTGSIY PERIYCVQYD ESDLHFIQRL CEEEGIHYHF QHSATGHKLV
FGDDQTVFKK LAPVAYQQDS GMVASDPVIK RFDLRLETRT SRTTRRDYDF EKPRLTLESE
NRGDALPDLE DYDYPGRFVD RERGKHLAKR ALERHRSDFQ LAEGKSDQPL LVSGHFLALK
EHPKAKWNDL WLLTEVHHEG KQPQVLEESV TSDTTALKDD FHQGYRNRFQ ATPWDVPNRP
PLRHPKPRIL GSQSAVVTGP KGEEIHCDEY GRVKVQFHWD RDGQADDKTS CWLRVSSAWA
GAQYGGIAIP RIGMEVLVTF LEGDPDQPLI SGCLYHKENT VPYALPANKT RTTFKTLSSM
GGGGFNELRI EDKKGQEQIF LHAQRDWDEN IEHDQKIRVG NERHDVVEKN SYTEFKAEEH
HTVYADRKVE ARANDHLTVG VNQHIKIGTG QFIDAGQEIH LSSGMKVVLE AGAELTLVGG
GSFIKIDGGG VTMSGPAINI NSGGGPGSGT GAAPLMPGVL KQADADKAGA VLTPAQINTL
KRNAPFCEEC EKCKAGACAI
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