| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2042 |
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| Symbol | |
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| ID | 3716091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2323362 |
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| End bp | 2328092 |
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| Gene Length | 4731 bp |
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| Protein Length | 1576 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Rhs family protein |
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| Protein accession | YP_347774 |
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| Protein GI | 77458269 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.901099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTT TGATGGGTGA GATTGTTGCC AATCTCAATG CAAAACAGCC TGATGCTCAG
GCCATCATCA GCGACTTCAA GAAGTGTCTG AAAGATTATC GCGAGCATGC CGAAGCCTGG
TACGGCGGTA TTCTGGACGC AGAGCAGCAG TTCAAGGTCG GTGACGAAGT CGGCACGGCG
GACAAGGACA GCAAAAAGGA AAATACCCTT TATGCCAACT GCCCTGCCAA CGGCAAGCTC
GTGCTCGTAC ACAGTTTCGA ATCCGCTCGC TTTGTGCCGA TCGGCAATAC GCCGGTACGT
CTGACGCCTG TGGTCGATGG TCGCTTCGTT GGCAAAAACG AAGTGGGGCC GGCGATCAAC
AAGACCATCG ATGCGACCGG CATCCTCGAA GTCTCGGGCC TTACACCGAA CCAACAATAC
AAGATCACCT TCTTCCCCAA CCCTACGCCT GCCCAGATCG ATAGTCTGTT CAACTCCTAT
CAGGGGGTAA TCGGCGAACT TGGAGGCTGG TTACAGACGG AGTGGAGCAC CAGTTTCCTA
CCGCTCTGGC AAGCGCACAC CGATGCCTCG CTGGGCGGGC GCGCCCTGCA AGAACTGGAA
GCCGCATGGG AAGGTTTTCT GAAAGCGATC ATGGGTTTGT GGGGCGATAT CAAAAGCCTC
TATGACCTGG TTGCGCACCC TCGTGAGAAC TACGAGAAAC TGAAAAACTT CTTCACCGAA
GAACAGATCA AGAAGATTTA TGACGCCTCC GCAGAGGCCA TTCACACTGC CCTGCTGATT
GCCAGCGACG AACCACTGAT GTGGATCTAC GTCGCAGCAA TCGTGGCCTG GGTGAAAATG
CTGCCGCCGC AAACCTGCAC CGAAGTTCTG GCTCAGATGA GCACGGAGTT CCTGCTGAAC
ATTCTGGTCG GCGTCGTCCT GACTGGCGGT CTCGGTCTGG CGGTACGTGT CGGCACGAAA
GCCATCAAAG GCGTACAAGC CAGCGGTAAA GTCGTGAAGC TGATTGAAGA CTTCACGGGC
ATGCTGATGA AAGTCAGCAA ATCCAAGGCA ACACCGCATA CCGAGGCGTC GAGGCCTTTG
CTGCTTAATG GTGATGCGGC GTTTAACCCG GCGCGCAAGG CCGATGTTCA GATTGCCAGC
CACAAACCTG CTGAAACCGC TAAGGCACCT GAACAGAAAC ATCCTGTCAG CAGCGGAAAA
GTTGAATCCG ATGCGCAGGT TCAAGCCCGG AGAAAAAATG AACCTGTCTC TCGAGCAGAG
CAAGTAGAAA AGGTCGACAA CGCTCCTGAT CAGTCAAAAA ACCCGGCGGA CAAACCTGCC
CTGTGTGTCG ACGACACCTG CTCCGACGGT GAACCGGTTT CTATGGTGAC TGGCGAGGAG
TTGTTAAGTA TTACAGATGG CGCACTGGCC GGTTTGCTTC CTTTCAAATG GACGCGCCTG
TACCGCAGCA GTGCCGTGGA AGTCGATAGC CGTCTGGGCC ATGGCTGGAG CCATTCTCTA
TCCCATCGCT TGCAACTCGA CGATGAAGGT GTGCTGTGGA CGGACGATGA AAACCGTCAA
ACCCGCTTCC CGATGCCGAG TGAACAACGC CCCTCTATCA CCAATAGTCT GGCGCAAGCT
GCGATTTTCC TCGGTGACGC TCCCGGGGAA CTGATCCTCA CGCAGGCTGG CGCGAAAGCC
AGTTTCTATC ACTTCCGTGC CGGGCGCTTG ACCACCATCA GCGACGCCTA TGACAACCGG
GTGCACATCA GCTATGACTT GGTCGACCGC ATCCAACGTA TCGACAATGG CGCTGGCCGT
TCGCTGTTCG TTCGTTACGA CGGTCGACAC ATTGCATCGA TAGATCAACA GCAGCAGCGT
GCGGAATACG ACGAGCGCGG CGAACGGCAA GATCCATGGC TGACCATTCA GACACTCGTC
ACCTACCGCT ACAACGCTCA CAACCAGCTC ATCGCTTCGA CCAACGCCGT CGGTGAAACC
GAGTATTACC GCTACAACGA CCAACACGTC ATTCTTGAAC GGCAACTGGC CGGTGGCGCC
AGTTTCTTCT GGGAGTGGGA GCGTGAAGGC AAGCATTCCC GTTGCATTCA CCACTGGGCC
AACTATGCCC AAATGGAAGC GCGTTACGAA TGGGACGATA AAGGCTCGGT AACCGTCTAC
AACGCTGACG GTAGCGAGCT TGTCTACGTG CATGACGAAA ATGCGCGTTT GGTCAGCGAA
ACAGCACCCG ATGGCGGCGA AACGCAAAAT ACCTATGACG ATCAAGGTCG TCTGGTCGCT
GTAAAAGATC CAATGGGCGC CATCACTGAG TACCAATACA GTGAGGCCGG TCGCTTGATG
GCGGTGATTC CACCGGAAGG TCAGCCTACC CGTTACAACT ACTTCAACGG CCAGCTCATA
GACGTCCAGC GCGGCAAGGC TCGCTGGCAG TACGATCGCA ACCGTCAGGG CGACATCACC
CGACAAATCG ACCCGCAGGG CAACGAAACA CATTACAGCT ACGATCGTCA GGGCCGACTA
CTCGAAATTC GTTACCCTGA TGGCAGCCGT CATCAGTTGG GCTGGAACAA TCTAGGTCAG
TTACTGGAAG AGCGCCTTCC GGACGGTGGC CAGCGCAAGT ATCGCTATGA CGCTCTCGGA
CGCCAGATCA CCCGCCAGGA CGAATTCGGC GCCATCAGCC AATACCAATG GGACGCAGTC
GATCGCCTGA CCCAGGTCAC CCTGCCCGGC GGCGCCACCC GAGCTTTCAC CTACAACCCA
TACGGACGCG TCACTGCCGA ACGCGATGAG CTCGGCCGCA TCACCCGCTA CGAATACGCC
GACAACCTGC ATCTGGTCAG CCGCCGCATC AACCCCGACG GCAGCCAGTT GCGCTATCGC
TACGACAATT CAGGTCTGCT GCTCACTGAA ATCGAAAACG AACACGGCGA GCATTACAAA
CTCGACTACT ACTCGAACGG CCTGATCCAG CAGGAAACCG GTTTCGATGG CCGCCGCACC
GCGTACGAAT ACGACCTCAA CGGTCAATTG CTGAAGAAAA CCGAATTCGG CGATGACGGC
AGCGAACTGG TTACCGAGTA CCAGCGCGAT GCTGCCGGTC GACTGCTGGT GAAAACCCTC
GCCGATGGCG AAGAAATACA CTACAGCTAC GATGCCCTGG GCCGTTTGGT GAATGTCGAC
GACGGACACT GGCCGCTTGC CTACGAATAC GACGTGCAGG ATCGCCTGAT CACCGAACAC
CAGGGTTGGG GCACCACACG TTACGAATAC GACAGCGTCG GGCAACTGAG TCACTGCCGC
CTCCCCGACG GCAGCACACT CGACTACCGC CATTTGTCAG GCGGACGTCT GAGCAGCATC
GACCTCAACG GCTCACGCCT GACCAGCCAC CAATTCAGCG CCGGTCGCGA ACAGCAGCGC
CAGCAAGGCC TGTTGCTCAG CCAATACCAG TACGACGAAC AAGGTCGCCT GCAAGCGCAC
AGCGTCAGCC AGCGTGAAAA AAACCTGTTC CAGCGTCGCT ATAACTACGA CGCCAACGGC
AACCTCGCCG GCATCGACGA CAGCCGAAAA GGCAACCGCA GCTTCCACTA CGACCCGCTG
GACCGCTTGA CCAGCGTACG TGGCGCGACA CCTGAAACCT TCGCCCACGA TCCGGCCGGC
AACCTGCTCG GCCAGAACAA CGAAGGCACA GCCAACCTCG CCAACGTCAA AGGCAACCGT
CTGCTGATGC AAGGCGACCG CCACTACGAC TACGACGCCT ATGGCAACCT GATCCGCGAA
CGCCGTGGCA CCGGACAGAA ACTCGTCACC GAATATCGCT ACGATTGCCA GCACCGCTTG
ATTGGCGCCA GCCTACCGGG TGGCAGCACT GCATCCTATA AGTACGACGC CTTCGGTCGC
CGCATCGAGA AAACTGTCGA TGGCCATACC ACCGAATTCT TGTGGCAAGG CGAACGCCTG
ATCGCTGAAA GCGGTGACAA CCGCTATCGC ACCTACATCT ACGAACCCGG CAGCTTCCGC
CCGCTGGCGA TGCTCGACGG CGAAGGCCCG CGCAAGGCGA CGCCGTTCTA TTACCAACTC
GATCACCTCG GCACACCGCA GGAACTCACT GACTACAGTG GCGAGATCAT GTGGTCGGCG
AAGTACCGCG CCTACGGTAA TCTCGCCGCC TTGGACATCG GCGAAATCGA TAATCCACTG
CGCTTCCAGG GTCAGTATTT CGATTCCGAG ACGGGGTTAC ATTACAACCG GCACCGCTAC
TACAATCCGA GCAGTGGGCG CTTTTTGACG CCGGATCCAA TCAAGCTTGC GGGTGGGTTA
AATAGCTACC AGTACGTGCC TAACCCAACA GGCTGGATAG ATCCATTGGG GTTGGCTTGT
AAACAAGCTA ACGGCCCCAC CCCCAAAAAA CCTCCGCAAA AAGACACACC TCCTGAGATA
GGAGAAACTC TAGAGTTTGA ACATTTCGAG CAAGCCCGCA ACGCAGCACT TGAGTGGCTC
GAAAGTAATG GGTTCAAGGC CGAGAAACCT ACTATTGGCA AGTTTGGTAC AAACGCAGGA
AAGAACGTCG GCATGCAAAC CGCTGATGGA AAGACTGGCT ACCGGATTGA ATACGATGAG
AGAAGTGGTG CACACATAAA CGTTTGGTCA GGAAAAAAAC CAGCACCCCA CTACCTATTC
AACGCAAGCG AAAAAACTGT ACTAAAATTA CTCAAGGCAT TCAAAAAATG A
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| Protein sequence | MSILMGEIVA NLNAKQPDAQ AIISDFKKCL KDYREHAEAW YGGILDAEQQ FKVGDEVGTA
DKDSKKENTL YANCPANGKL VLVHSFESAR FVPIGNTPVR LTPVVDGRFV GKNEVGPAIN
KTIDATGILE VSGLTPNQQY KITFFPNPTP AQIDSLFNSY QGVIGELGGW LQTEWSTSFL
PLWQAHTDAS LGGRALQELE AAWEGFLKAI MGLWGDIKSL YDLVAHPREN YEKLKNFFTE
EQIKKIYDAS AEAIHTALLI ASDEPLMWIY VAAIVAWVKM LPPQTCTEVL AQMSTEFLLN
ILVGVVLTGG LGLAVRVGTK AIKGVQASGK VVKLIEDFTG MLMKVSKSKA TPHTEASRPL
LLNGDAAFNP ARKADVQIAS HKPAETAKAP EQKHPVSSGK VESDAQVQAR RKNEPVSRAE
QVEKVDNAPD QSKNPADKPA LCVDDTCSDG EPVSMVTGEE LLSITDGALA GLLPFKWTRL
YRSSAVEVDS RLGHGWSHSL SHRLQLDDEG VLWTDDENRQ TRFPMPSEQR PSITNSLAQA
AIFLGDAPGE LILTQAGAKA SFYHFRAGRL TTISDAYDNR VHISYDLVDR IQRIDNGAGR
SLFVRYDGRH IASIDQQQQR AEYDERGERQ DPWLTIQTLV TYRYNAHNQL IASTNAVGET
EYYRYNDQHV ILERQLAGGA SFFWEWEREG KHSRCIHHWA NYAQMEARYE WDDKGSVTVY
NADGSELVYV HDENARLVSE TAPDGGETQN TYDDQGRLVA VKDPMGAITE YQYSEAGRLM
AVIPPEGQPT RYNYFNGQLI DVQRGKARWQ YDRNRQGDIT RQIDPQGNET HYSYDRQGRL
LEIRYPDGSR HQLGWNNLGQ LLEERLPDGG QRKYRYDALG RQITRQDEFG AISQYQWDAV
DRLTQVTLPG GATRAFTYNP YGRVTAERDE LGRITRYEYA DNLHLVSRRI NPDGSQLRYR
YDNSGLLLTE IENEHGEHYK LDYYSNGLIQ QETGFDGRRT AYEYDLNGQL LKKTEFGDDG
SELVTEYQRD AAGRLLVKTL ADGEEIHYSY DALGRLVNVD DGHWPLAYEY DVQDRLITEH
QGWGTTRYEY DSVGQLSHCR LPDGSTLDYR HLSGGRLSSI DLNGSRLTSH QFSAGREQQR
QQGLLLSQYQ YDEQGRLQAH SVSQREKNLF QRRYNYDANG NLAGIDDSRK GNRSFHYDPL
DRLTSVRGAT PETFAHDPAG NLLGQNNEGT ANLANVKGNR LLMQGDRHYD YDAYGNLIRE
RRGTGQKLVT EYRYDCQHRL IGASLPGGST ASYKYDAFGR RIEKTVDGHT TEFLWQGERL
IAESGDNRYR TYIYEPGSFR PLAMLDGEGP RKATPFYYQL DHLGTPQELT DYSGEIMWSA
KYRAYGNLAA LDIGEIDNPL RFQGQYFDSE TGLHYNRHRY YNPSSGRFLT PDPIKLAGGL
NSYQYVPNPT GWIDPLGLAC KQANGPTPKK PPQKDTPPEI GETLEFEHFE QARNAALEWL
ESNGFKAEKP TIGKFGTNAG KNVGMQTADG KTGYRIEYDE RSGAHINVWS GKKPAPHYLF
NASEKTVLKL LKAFKK
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