Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2034 |
Symbol | |
ID | 3716083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2318814 |
End bp | 2319686 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | VanW |
Protein accession | YP_347766 |
Protein GI | 77458261 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.726282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCGCC CTTTCAAGTT CAAGGAAGAC AACGGCCCGC GCCGTTCGCC AAGGATGAAA CCACTTTCCC TCTACCACCC GACCCTTTAC TGGCTGCGCG TGTGGCAAAA AAGACTGTTT CGCCACATTG CCTGGCACTG CTCGAGCAAA CGCTACGCGC GGCCTGCCAC GACGTCCGAG CGCCTGCCTT ACCGCTACCT CAAACACACC TCAAAACTGA TCCGCAAACT CGGCGAATCC GACCTCGCGC TGCAACACAA CAAAGTCATC AACCTCAAAC TTGCCGTCGC CGCCATCGAC GGCGTCACCA TCGCCCCCGG CGAATATTTC TCCTTCTGCC GCCTCGTCGG CCGCCCGACC CGCGAACGCG GCTACGTCGA AGGCATGGAA CTCTCATTCG GCGAAGCCCG CACCGGCATC GGCGGCGGCA TCTGCCAACT CAGCAACCTC ATCCACTGGA TGGCCATTCA CTCACCCTTG GTCGTCATCG AACGCGCCAA CCACAGCTTC GACCCCTTCC CGGACGACGG CCGCGTCCTG CCATTCGGCT CCGGCGCGGC GATCTTCTAC AACTACATCG ACCTGGTACT GCACAACCCG ACGGATCGCA GCTTTCAGCT GAAGTTGAAA GTGGGGGAGA CGCAGCTGGA GGGAGAGTTG TTGTGTGATC GGGAGCGGGC TTATCGGTAT CACGTGTTCG AGGTGGGGCA TCGGTTTGTG CGGGAGGGGG AGCGGGTGTA TCGCGAGAAT GAGATTTGGC GGGAGGTGAG GGAGAAGGGG CAGGTGGGGG CGTTGGTGGA GAGGGAGCGG TTGTATGGGA ATCGGGTGGT GGTTAAGTAT GAGGTTTTGG AGGGGATGAT TGAGGGGGGA TAG
|
Protein sequence | MRRPFKFKED NGPRRSPRMK PLSLYHPTLY WLRVWQKRLF RHIAWHCSSK RYARPATTSE RLPYRYLKHT SKLIRKLGES DLALQHNKVI NLKLAVAAID GVTIAPGEYF SFCRLVGRPT RERGYVEGME LSFGEARTGI GGGICQLSNL IHWMAIHSPL VVIERANHSF DPFPDDGRVL PFGSGAAIFY NYIDLVLHNP TDRSFQLKLK VGETQLEGEL LCDRERAYRY HVFEVGHRFV REGERVYREN EIWREVREKG QVGALVERER LYGNRVVVKY EVLEGMIEGG
|
| |