Gene Pfl01_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2033 
Symbol 
ID3716082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2317802 
End bp2318623 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347765 
Protein GI77458260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.433956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGA TCGATTCCAC CTCTAAACAA CTGCCCGCCT TCAGTCTTGT ATTGGTCAAT 
TACAAGACGC CGGAAATAAC CCGGATGTGC CTGGAGTTTC TCCAGCAATA CGTCAAGGAT
CATCAAATTC CGGTGTGGGT GGTGGACAAC GATTCCGCCG ATGAAAGCCT GATCTACTTG
CGGTCTCTGG ACTGGATCAA CTTGATCGAG CGCCCTTCAC CCGGCAAGGA AGCGGGGCAT
ATTGCTCATG GCAAGGCACT TGATCTGGCA CTTGCGAAAG TTGAAACCGA TTACCTGTTT
TTGCTGCACA CCGACACTTT CGTTTTTGAC AGTACTGTCT TTTCGATGAT GATGAATGAG
TGCATGCAAT CTTTGGATAC AGCGGCGGTC GGTTGCGTCG AACAATTGGA TCGCGGCGTC
CTTAGAGACA CCTGGCGTTT GTCTTCGCGT TATTTCAAAC ACTATTTCCG CCGGGCAAAA
CAGCACTTGG GGTTGCCCTC CCGAGATCCA AAACCCTACC GGGAAACTCA CCTGAAAAGC
TTCTGCACCT TGTGGAATGC ACGGCTGATC AAGGCTCACG GGCTGCATTT TTCGATGGAC
GACCGGGTCC CGGGATACAC GCTGCAGGAT CGTTTAAGCA GCCTTGGCTA CGGCATCAAA
TGCCTCTCGC CGCGGACGAT CTTCCGCTAC CTGGATCACA TCCAGGCCGG CACCGTGGCC
GCGATCGGTG GATACGGCAA ACAGCACCGC CGCACCACCA TGTATCAGGA AACGCTCAAG
CGCCTTCAGT TACAACAGCG CATGCGACCC GCCAAATCGT AA
 
Protein sequence
MSAIDSTSKQ LPAFSLVLVN YKTPEITRMC LEFLQQYVKD HQIPVWVVDN DSADESLIYL 
RSLDWINLIE RPSPGKEAGH IAHGKALDLA LAKVETDYLF LLHTDTFVFD STVFSMMMNE
CMQSLDTAAV GCVEQLDRGV LRDTWRLSSR YFKHYFRRAK QHLGLPSRDP KPYRETHLKS
FCTLWNARLI KAHGLHFSMD DRVPGYTLQD RLSSLGYGIK CLSPRTIFRY LDHIQAGTVA
AIGGYGKQHR RTTMYQETLK RLQLQQRMRP AKS