Gene Pfl01_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2027 
Symbol 
ID3716076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2311467 
End bp2313914 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347759 
Protein GI77458254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC TCAGTCACTG GCGACGCCAT CCGGTGCAGT TTTTCAGTGT GCTGACCGGG 
TTGTGGCTGG CCACCAGCCT GTTGACCGGA GTCGAAGCCC TCAACAGTCA GGCGCGGGAC
AGTTACGCCC GGGCCAGCCA GTTGATCGGC GGCGAACCCC AGGCCAGTCT GAGCACGCCG
AACGGCGCGA CGTTCCCGCA ACAATGGTTC ATCGACCTGC GGCGACAAGG CTGGCCGGTG
TCGCCGATGC TGCAAGGGCG CTTGATACTC AAGGGCCACG AAAACCAGCG CCTGCAATTG
ATGGGCATCG AGCCTGTGTC GTTGCCCGGC GACAGCGCGG TGGCCGGGCA GGCGATGCCA
ATCGAGCGCA TCGTCGAGTT CTTTAGCCCG CCGGGCAGCA CCTGGATTTC TCCCGAGACG
TTGCGTGCGC TGAACCTCGC CGAGGGCGCG ACCCCGGCCA CCGAAACCGG CCAGACGTTG
CCGCCGCTGC GAGCGCAAAC CGACATGGCC CCCGGCGTGC TGCTGGTGGA CATTGGCGTC
GCTCAGCGCG TGCTCGAACA GTCCGATCAA CTGTCACGTC TGCTGTTGCC GAAGGATTTT
CACGCCGACG TCCCGGCCGC GTTCAAGGGC CAGTTGCAGC TCAAGAGCAG TGGCGAGGAA
AACAACCTTG CGCGACTGAC CGAAAGCTTC CACCTCAACC TCGATGCGCT CGGGTTTCTC
TCGTTCATCG TCGGCTTGTT CATTGTTCAC GCGGCCATCG GTCTGGCGCT GGAACAGCGC
CGGGGATTGC TGCGCACGTT GAGGGCCTGC GGGGTCAGCG CGCGGATGCT GATCGCTTGC
CTGATCGTCG AACTCGGCGC GCTGGCGTTG ATCGGCGGGT TGTTCGGCGT GGTCAGCGGT
TACTGGCTGG CAAGCGTGCT GTTACCGGAC GTCGCGGCCA GCCTGCGCGG TCTGTACGGC
GCGGAAGTGG CGGGGCAGTT GCGCCTGAGT CCTTGGTGGT GGTTCAGCGG CATCGGCTTG
AGCCTGCTCG GCGCGTTGCT GGCCGGGGCC AACAGTCTGC TGCGTGCAGC GCGACTGCCA
TTGCTGGCGG TGGCGGATCC GCAGGCCTGG CATCAGCAAC ATGCGCGCTG GTTGCGGCGT
CAGGGTTGGG TCGCGGGTAT CTGTGCAGTG ATTGCGCTGG CGGCGTTGGT GTGGGGCAAC
AGCCTGGGCA GCGGTTTTGT GTTGATGGCG GGGCTTTTGC TCGGCGCCGC GCTGGCGCTG
CCGGTGTTGC TCAGTGCGTT GCTCAACGGT TTGCTCGGTC GCAGCCGCTC GGTGCTCGGG
CAGTGGTTTC TCGCCGATTG CCGCCAGCAA TTGCCGGCGC TGAGTCTGGC GTTGATGGCG
CTGCTGCTGG CGATGGCGGC AAACATCGGT GCCGGCAGCA TGACCGCCGG TTTCCGCCAG
ACCTTCAACG ACTGGCTCGA ACAACGGCTC ACCGCCGAGC TTTATCTGAA CCCGAGCAAC
CCGGCGCAGG CGCGGGAGCT GTACACCTGG CTCAAACAGC AAGCGAATGT CACCGCGATC
ATGCCCAACT GGCAGGTCTC TGTGACGCTG CAAGGCTGGC CGGCGGACGT GTTCGGGATC
ATCGATCATC CGCACTATCG CCAGCACTGG CCGTTGCTCG AATCTCGAGG AGACGACCCG
TGGGCGGCGC TGGCCAAGGA CGATGCGGTG ATGCTCAGCG AACAACTGGC GCGGCGCTTG
AAAGTGACGC CGGGCGATCA CCTGTCGATT CCCACGCCGG GCGGGTCGTG GTCGCCGCGC
ATCGTCGGCA TCTACGCCGA CTACGGCAAT CCCAAGGGCC ATGTGCTGGT CAACAGCAAT
CACCTGTTGC GCGGCTGGCC ACAGCTGACG CCAAACCGCT TCAACCTGCG CATCGACCCG
CCGAACATCC CGGCGTTGCT CACGGCCTTG CAGGCACGCT TCCAGCTTGA TGACAGCCGG
ATCGTCGATC AGGCGCGGCT CAAGGGCTGG TCGGTGCAAG TCTTCGAACG CACCTTCGCC
GCGACCGCCG CGCTGAATAG CCTGACGCTT GCCGTCGCCG GCGTGGCGCT GTTCATCAGC
CTGCTGACCC AGAGTCAGAG CCGTCTCGGC CAGCTCGCAC CGTTGTGGGC GTTGGGCGTG
ACGCGACGGC AGTTGATGCT GCTCAACCTC GGGGAAACGT GGCTGTTGGC GCTGCTGACG
CTGGTGCTGG CGTTGCCTTT GGGCATCGGC CTGGCGTGGT GCCTGGACGC TGTGATCAAC
GTGCAGGCTT TTGGCTGGCG TCTGCCGCTG CGGGTGTTTC CATGGCAGTT GCTGCAACTG
ATGGGGCTGG CGCTGCTGGC GACGTTGCTG GCCTCGGCGT GGCCGCTGTA TTCGCTGTAC
CGCACGCAAC CGGCGGACCT GCTGAGGACG TTTGCTCATG AAGACTAG
 
Protein sequence
MALLSHWRRH PVQFFSVLTG LWLATSLLTG VEALNSQARD SYARASQLIG GEPQASLSTP 
NGATFPQQWF IDLRRQGWPV SPMLQGRLIL KGHENQRLQL MGIEPVSLPG DSAVAGQAMP
IERIVEFFSP PGSTWISPET LRALNLAEGA TPATETGQTL PPLRAQTDMA PGVLLVDIGV
AQRVLEQSDQ LSRLLLPKDF HADVPAAFKG QLQLKSSGEE NNLARLTESF HLNLDALGFL
SFIVGLFIVH AAIGLALEQR RGLLRTLRAC GVSARMLIAC LIVELGALAL IGGLFGVVSG
YWLASVLLPD VAASLRGLYG AEVAGQLRLS PWWWFSGIGL SLLGALLAGA NSLLRAARLP
LLAVADPQAW HQQHARWLRR QGWVAGICAV IALAALVWGN SLGSGFVLMA GLLLGAALAL
PVLLSALLNG LLGRSRSVLG QWFLADCRQQ LPALSLALMA LLLAMAANIG AGSMTAGFRQ
TFNDWLEQRL TAELYLNPSN PAQARELYTW LKQQANVTAI MPNWQVSVTL QGWPADVFGI
IDHPHYRQHW PLLESRGDDP WAALAKDDAV MLSEQLARRL KVTPGDHLSI PTPGGSWSPR
IVGIYADYGN PKGHVLVNSN HLLRGWPQLT PNRFNLRIDP PNIPALLTAL QARFQLDDSR
IVDQARLKGW SVQVFERTFA ATAALNSLTL AVAGVALFIS LLTQSQSRLG QLAPLWALGV
TRRQLMLLNL GETWLLALLT LVLALPLGIG LAWCLDAVIN VQAFGWRLPL RVFPWQLLQL
MGLALLATLL ASAWPLYSLY RTQPADLLRT FAHED