Gene Pfl01_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2021 
Symbol 
ID3716120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2304796 
End bp2305821 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID 
Productpolysaccharide export protein 
Protein accessionYP_347753 
Protein GI77458248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA AGATACTGGT TCTGCTGATG CTGCCGCTTG CAGGTTGCTC GAGCACTTCC 
GAAACCCAGA ACATGCCGGT GAACATTCTC ACCGCCACCC CGGCCAACGC TCAGGCCACC
GACATGCCGA AGGTCGAGCA GACCCTGCGC CCGCAGGATG TGCTGGACGT GATCTTCCAC
ATCAGCACCA GCGGCTCGGA CGCTTATCGC GTGCAGTCGG GGGACCAGAT CGGCCTTAAC
TTCACTGCTG CCAGCCAGCT CAATGGCAAC CAGTTGGTGC TGCCGGACGG CACCATCGAA
CTGCCGGGCG CCAACACCTC GGTGAAAATT GCCGGGCTGA CCAGCGAAGA AGCGCGCCAG
GAAATCCAGC GCGCCTATCA GCGCAAACAA CTGTTCCAGC CCAACCGCAA TCAGTTGACG
GTGCAGATCA TCAGCCCGCT GACCAACGAG CAGAACCTGA AAAGCGCCCT CAACCACCCG
GCCACCGGCA TGAGCCGCGA AATCACGGTC GGCACCGACG GCTACGCCAG CTTCCCGGAA
ATCGGCGCGG TGCCGCTGCA AGGCATGACC GTCAACCAGC TCGAAGCGTT CCTCAACAAG
AAGTACGCGC AACTGCCAGG AAGGATGACC GTGGACGTGC TGCTCAAATC CACCGCCGGC
AATGAAATCT ACGTGCTGGG CGAGGTCGGC CAGCCGGGTT CCTACCCGAT CCGCCGGCCG
GTGTCGGTGC TGGAGGCGCT GACCCTGGCG CGCGGCACCA ACGTCAAGGC GCGGCTCGAT
TCGGTGGTGA TCATGCGCCG CAACGGCAAT CAGGTGCAGG CCGTGCGCTA CGACGTCGAG
AAAGCATTGT CGGGCGAGGC GCCGCAAATC GCCTACCTGC AACCGGACGA CATGCTGTAC
GTGCCGAAAA CCAAGCTGGC CAGCGCTGGC GAACTCGCCC GGCAACTGGC CGACGTGGTG
CTGTTCCAGG GCGTGGGCTT CAGCTTCGGC TACCGCGTCG ACAACAAAGA CAGCAACAAC
AACTGA
 
Protein sequence
MNAKILVLLM LPLAGCSSTS ETQNMPVNIL TATPANAQAT DMPKVEQTLR PQDVLDVIFH 
ISTSGSDAYR VQSGDQIGLN FTAASQLNGN QLVLPDGTIE LPGANTSVKI AGLTSEEARQ
EIQRAYQRKQ LFQPNRNQLT VQIISPLTNE QNLKSALNHP ATGMSREITV GTDGYASFPE
IGAVPLQGMT VNQLEAFLNK KYAQLPGRMT VDVLLKSTAG NEIYVLGEVG QPGSYPIRRP
VSVLEALTLA RGTNVKARLD SVVIMRRNGN QVQAVRYDVE KALSGEAPQI AYLQPDDMLY
VPKTKLASAG ELARQLADVV LFQGVGFSFG YRVDNKDSNN N