Gene Pfl01_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2019 
Symbol 
ID3716118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2302098 
End bp2303189 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content66% 
IMG OID 
Productglycosyl transferase, group 1 
Protein accessionYP_347751 
Protein GI77458246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.891192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACACGC CGTCCGCCCC GAACGCCGCC CTGCCGATCA TGCATTTGCT CAGCAGCGGT 
GGCTTCTACG GGGCCGAGCG CATGTTGCTC GATCATTGCC TGGCGACGCC GGGGCAGCAC
CAGGTGCTGT TCCTCGATGC GCCGCCGGAA CTGATCGCGC GCTTTCGCGA GGCCGGCGTC
GACGCACAAG GCTGCGCAGG GCTCGCTGCC CTGCTGCGGC ACTTGCGTCA GCGGCGCGGT
GAACAGCCGT TGATCAACAC CCACAATTTC AAAGGCCTGT TGTTCGGCTG GGTCGGCGCC
ACGCTGTTGC GCCTGCCGCT GGTGATCACT CAACACGGTT TCACCCCGCG CAGCCGCAAG
CAGAAGTTCT ACACCTGGCT GAGTCTGCAA CTGTGCCGCA CGGCGTCGGT GGATCGAGTG
GTGTGCGTCG CCGAGAGCAT CGCGGTGTTG CACCGTCAGG CCAGCGTACG TGCGGAAAAG
TTGCAGGTGA TCCCCAACGG ATTGCCGGCA GCCGCCGCGC TGCTTTCCGA TGCGCCAAGA
CAACGCTGGC TCGCCGGCTA CGTCGGGCGC CTGAGCAGTG AGAAAGGCCC GGATCTGTTT
CTCGACGCGC TGATCCCGCT GTGTCACCAG CACCCGCAAC TCGACGCGGT AATGCTCGGC
GACGGCCCGG AACGCGAAGA CTTGCAGGCA CGGATCGACG CCGCCGGTTT GCAGCAGCGC
ATCCGCTTGC CGGGTTACCA GACCGACATG CGGCACTGGT GGCAGCAACT GGATGCGCTG
GTGATCAGCT CGCGCACCGA AGGCACACCG ATGATTCTGC TGGAAGCGAT GCAGGCCGGG
GTGCCGGTGG TGGCATTCGG CGTCGGCGGA ATTCCTGATG TACTGGAGAA CCGCCACAAC
GGCTTGCTCG CTGCCCCGAC CGACAGCGCC GCCCTCGCCC GTCAGCTCGA CACCTTGCTG
TCCGAGCCCG GACTGGCACG GCAACTGCGC GATAACGCAA AACGCACGCA ACAGGACCGC
TACGACCTCA AGGCCCTGGC CGAACGCTGG TCGCAGCTGT ACATCCGCAC GGCACGGGAG
GCACGCGCAT GA
 
Protein sequence
MNTPSAPNAA LPIMHLLSSG GFYGAERMLL DHCLATPGQH QVLFLDAPPE LIARFREAGV 
DAQGCAGLAA LLRHLRQRRG EQPLINTHNF KGLLFGWVGA TLLRLPLVIT QHGFTPRSRK
QKFYTWLSLQ LCRTASVDRV VCVAESIAVL HRQASVRAEK LQVIPNGLPA AAALLSDAPR
QRWLAGYVGR LSSEKGPDLF LDALIPLCHQ HPQLDAVMLG DGPEREDLQA RIDAAGLQQR
IRLPGYQTDM RHWWQQLDAL VISSRTEGTP MILLEAMQAG VPVVAFGVGG IPDVLENRHN
GLLAAPTDSA ALARQLDTLL SEPGLARQLR DNAKRTQQDR YDLKALAERW SQLYIRTARE
ARA