Gene Pfl01_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1999 
Symbol 
ID3716137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2278603 
End bp2279949 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347731 
Protein GI77458226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.71064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.133836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCTT TACTGTCCAA AACCGCGACC GTCCTGGTCG TGAGCGCCTT GGCCCAGGGC 
ATTGCCCAGG CCGCTCTGTT CGCCGTCGAC CCGGGTCCCT ACACACCGGC CAATGGCGGT
TTCGCCAGCT GGTATCAGGA CACCCACGGT CGCACCCTGG ATCTGTGCCT GTCCAAAGCA
CTCAGCTCAC GCGTGCCGAG CACCCCGGGC GCCCCGTCTT ACATGTGCTC GCTGCTGCCG
ACCCCCGGCG TGTTCGATGA CACGCAACCG CTCGTATTCC CCACCAACTT CCCCGATGAA
GCCTTCTGGT TCACTGGCGA TACCTCCATC GTCGATGCGG CACGCGGCAT CAATCTGACT
TACGTCAGCG CCGTCGAAGC TGCCTTTGCC GCCGGTGATC CGGTGGAGGG CGACCAGATC
AGCTTCGCGC GGATCCGCAT CCGGGTCGAT GTGCCCACCG CCGGCACCTA CGTCATCACC
CACCCCTACG GCGTCGATGT GTTCACCGTC GACACCCCCG GCCGGCGCGC GATCAACATG
ACCCGCGACA TCGGCATCGG CACCCCGCAA ACCTACGACG GCGCGCTCAA GGGTGACATC
GGCCCGTTCC TGCGCAGCGT CAACGGGCCG TACACCGAGA CCAACCCGTT GACCGGTGCG
GCCGAGCAGT TCGTGGGCGA TCCGAACCTC AATGAGGCCG TAACCGGCAG CCCGTTCAAC
ACCAACTTCG TACGCATCGA AGGCCCCGGT GGCATCGACC TGCGCAGCAC GACTTTCGCC
GTGTCCGGCA AGTTGTCGAC AGTGGTGCGG CCAACGCCTT TGATCACTGA GCGCAGCACC
TACTCGCGCA AGCCCGGTGA AAGCGCACCA GTGGCCCAAC AAGACGTGTT CGTCAAAGCC
CCGCCGGCAC CGGGCACCGC GGCCATCACC AGCAGCACGC CCGTGGTGAA CATGAAAGAA
GCCGACAGCA CCGGCAGCTG GTATGCGCAA TCGGCGGTCA ACCCGACTTT GCCGGCCGTG
TTGCAAGTGA CCGCCGACAA CCACCTGGCG ATCGCCACCA GCTCGCCGAC CACCCTGCCC
ATGACCCTGA CCGACCTGGT GGTGATCCAG CGCGCCGAGT ACAGCCTCAG TTCCGGGCAA
TTGACCGTGG TGGCCACGAC CAGTGACGAA ACCTCGCCAC CGGTGCTCAC CGCCACCTCC
GACACCGGCG CCGCTATCGG TGCGCTGGGT GGCGACGGTG CGGAGAAAAC CCTGGCCACC
GGGATCACGC CGATACCACC GGCCAAGGTT CGGGTGACGT CGTCCAACGG CGGCAGCGAT
ACCGAAGAAG TGGTCATCGT GCAATGA
 
Protein sequence
MHPLLSKTAT VLVVSALAQG IAQAALFAVD PGPYTPANGG FASWYQDTHG RTLDLCLSKA 
LSSRVPSTPG APSYMCSLLP TPGVFDDTQP LVFPTNFPDE AFWFTGDTSI VDAARGINLT
YVSAVEAAFA AGDPVEGDQI SFARIRIRVD VPTAGTYVIT HPYGVDVFTV DTPGRRAINM
TRDIGIGTPQ TYDGALKGDI GPFLRSVNGP YTETNPLTGA AEQFVGDPNL NEAVTGSPFN
TNFVRIEGPG GIDLRSTTFA VSGKLSTVVR PTPLITERST YSRKPGESAP VAQQDVFVKA
PPAPGTAAIT SSTPVVNMKE ADSTGSWYAQ SAVNPTLPAV LQVTADNHLA IATSSPTTLP
MTLTDLVVIQ RAEYSLSSGQ LTVVATTSDE TSPPVLTATS DTGAAIGALG GDGAEKTLAT
GITPIPPAKV RVTSSNGGSD TEEVVIVQ