| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1967 |
|---|
| Symbol | |
|---|
| ID | 3716240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2243251 |
|---|
| End bp | 2243877 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_347699 |
|---|
| Protein GI | 77458194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG TTCCTTACAA ACGCTTGAAC AAAGACGATG CCGTTGTGCT GTTGGTCGAC
CACCAGACCG GTCTGATCTC GCTGGTGCAG GATTTCTCGC CGAACGAGTT CAAGAACAAC
GTGCTGGCCC TGGGCGACAT CGCCAAGTTC TTTAACCTGC CAACCATCCT CACCACCAGC
TTCGATTCCG GCCCGAACGG CCCGATCGTG CCTGAGCTGA AAGAGCAATT CCCGGACGCA
CCGTTCATTG CCCGTCCTGG CCAGATCAAC GCCTGGGACA ACGAAGACTT CGTCAAGGCC
ATCAAGGCTA CTGGCCGCAA GCAACTGATC ATCGCCGGTG TGGTGACTGA CGTGTGCGTG
GCGTTCCCGA CCCTGTCGGC CATCGCTGAA GGCTTCGAAG TGTTCGTGGT CACCGACGCT
TCCGGCACCT TCAACACCAC CGTGCAACAA GCGGCGTGGG CGCGTATGTC GGCTGCCGGC
GCACACCTGC TGAACTGGTT TGCTGTGGCC TGCGAGCTGC AGGGTGACTG GCGCAACGAC
ATGGAAGGCC TGGCGAATCT GCTGTCGCAG CGCCTGCCGA ACTACCGCAA CCTGATCAAC
AGCTACACCA AGTTCACTGC CAAGTAA
|
|---|
| Protein sequence | MSNVPYKRLN KDDAVVLLVD HQTGLISLVQ DFSPNEFKNN VLALGDIAKF FNLPTILTTS
FDSGPNGPIV PELKEQFPDA PFIARPGQIN AWDNEDFVKA IKATGRKQLI IAGVVTDVCV
AFPTLSAIAE GFEVFVVTDA SGTFNTTVQQ AAWARMSAAG AHLLNWFAVA CELQGDWRND
MEGLANLLSQ RLPNYRNLIN SYTKFTAK
|
|---|
| |