Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1966 |
Symbol | |
ID | 3716239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2241342 |
End bp | 2243180 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347698 |
Protein GI | 77458193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG ATCTGATTCT GTTCAATGGC CAATTTCATA CGGTAGACCG CGAAAAACCC CTCGCCAGCG CCGTGGCAAT CAAGGACGGG CGCTTCGTCG CCGTCGGTAA CGATGCCGAG GCGATGGCGC TCAAGGGCGC CGGCACTCAA GTGGTCGACC TCAAGGGCCG CTGCGTGATT CCCGGCCTCA ATGACTCGCA CTTGCACTTG ATCCGTGGCG GTCTGAACTA CAACCTCGAA CTGCGTTGGG AAGGCGTGCC GTCGCTGGCT GATGCGCTGC GCATGCTCAA GGATCAGGCC GACCGCACAC CGACCCCGCA ATGGGTGCGC GTGGTCGGCG GCTGGAACGA ATTCCAGTTC GCCGAAAAAC GCATGCCGAC CCTCGAAGAA ATCAACCAGG CCGCGCCGGA CACCCCGGTG TTCATCCTGC ACCTGTACGA CCGTGCGCTG CTCAACCGCG CCGCGCTGCG CGTGGCCGGC TACACCCGCG ACACGCCGAA CCCGCCGGGT GGCGAGATCG TGCGCGATGC CAACGGCAAC CCGACCGGCA TGCTGGTGGC GCGGCCGAAC GCGATGATTC TGTATTCGAC GCTGGCCAAG GGGCCCAAGC TGCCGCTGGA GTATCAGGTC AACTCGACCC GCCAGTTCAT GCGCGAACTC AATCGGCTCG GCCTGACCAG CGCCATCGAT GCCGGCGGCG GTTTCCAGAA CTATCCGGAC GACTATCAGG TGATCGAGCA ACTGGCCAAA GACGACCAGT TGACCGTGCG CATCGCCTAC AACCTGTTCA CCCAGAAGCC GAAAGAAGAG CTGACCGACT TCCAGAACTG GACCGGCAGC GTCAAGTTGC ATCAGGGCGA TGACTTCCTG CGCCACAACG GCGCCGGGGA AATGCTGGTG TTCTCGGCAG CGGACTTCGA AGACTTCCTC GAACCGCGCC CGGACCTGCC GCAGACCATG GAACAGGAGC TTGAGCCGGT GGTGCGCCAC CTGGTCGAGC AGCGCTGGCC GTTCCGTCTG CACGCCACCT ACAACGAATC GATCAGCCGC ATGCTCGACG TGTTCGAGAA GGTCAACCGC GACATTCCGT TCAACGGTTT GCCGTGGTTC TTCGATCACG CCGAAACCAT CACCCCGCAG AACATCGAGC GGGTGAGGGC GCTGGGCGGC GGCATTGCGA TCCAGGATCG CATGGCCTTT CAGGGCGAAT ACTTCGTTGA CCGTTACGGC AAACAAGCCG CCGAAGCCAC GCCACCGATC AAACGCATGC TCGCCGAAGG CGTGCCGGTC GGCGCGGGCA CCGATGCCAC TCGGGTGTCG AGCTACAACC CGTGGACTTC GCTGTACTGG ATGGTCAGCG GTCGCACCGT TGGCGGTCTG GCGCTGTACG AAGAAGGTTT GCCACGCAGC ACCGCGCTGG AACTGTTCAC CCATGGCAGC GCCTGGTTCT CGTCCGAGCA GGGCAAGAAG GGCCAGATCA AGGTCGGGCA ACTGGCGGAC CTGGCAGCGC TGAGCGCGGA CTTCTTCAGC GTCGAAGAAG AAGCGATCAA GTGGATCGAG TCGGTCATGA CCGTGGTTGG CGGCAAGATC GTGTACGCCG CCGGCGACTT CGAAGACCTC GGCCCACGTT CATTGCCGGT GCTGCCGGAC TGGTCGCCGG TAGTGAAAGT CCCTGGCCAC TGGCGCCCGA ATTCGCCCTT GCAGGCCCAG GTGCACCAGT GCAGCGGCCC GTGCGCAGTG CATACCCACA GCCATGAAAA AGCGCGGATG TCGAATGCGC CGGTCAGCGA TTTCGCCGGT TTCTGGGGCG CGTTCGGCTG TTCCTGCTTC GCGTTCTGA
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Protein sequence | MNADLILFNG QFHTVDREKP LASAVAIKDG RFVAVGNDAE AMALKGAGTQ VVDLKGRCVI PGLNDSHLHL IRGGLNYNLE LRWEGVPSLA DALRMLKDQA DRTPTPQWVR VVGGWNEFQF AEKRMPTLEE INQAAPDTPV FILHLYDRAL LNRAALRVAG YTRDTPNPPG GEIVRDANGN PTGMLVARPN AMILYSTLAK GPKLPLEYQV NSTRQFMREL NRLGLTSAID AGGGFQNYPD DYQVIEQLAK DDQLTVRIAY NLFTQKPKEE LTDFQNWTGS VKLHQGDDFL RHNGAGEMLV FSAADFEDFL EPRPDLPQTM EQELEPVVRH LVEQRWPFRL HATYNESISR MLDVFEKVNR DIPFNGLPWF FDHAETITPQ NIERVRALGG GIAIQDRMAF QGEYFVDRYG KQAAEATPPI KRMLAEGVPV GAGTDATRVS SYNPWTSLYW MVSGRTVGGL ALYEEGLPRS TALELFTHGS AWFSSEQGKK GQIKVGQLAD LAALSADFFS VEEEAIKWIE SVMTVVGGKI VYAAGDFEDL GPRSLPVLPD WSPVVKVPGH WRPNSPLQAQ VHQCSGPCAV HTHSHEKARM SNAPVSDFAG FWGAFGCSCF AF
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