Gene Pfl01_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1966 
Symbol 
ID3716239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2241342 
End bp2243180 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347698 
Protein GI77458193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG ATCTGATTCT GTTCAATGGC CAATTTCATA CGGTAGACCG CGAAAAACCC 
CTCGCCAGCG CCGTGGCAAT CAAGGACGGG CGCTTCGTCG CCGTCGGTAA CGATGCCGAG
GCGATGGCGC TCAAGGGCGC CGGCACTCAA GTGGTCGACC TCAAGGGCCG CTGCGTGATT
CCCGGCCTCA ATGACTCGCA CTTGCACTTG ATCCGTGGCG GTCTGAACTA CAACCTCGAA
CTGCGTTGGG AAGGCGTGCC GTCGCTGGCT GATGCGCTGC GCATGCTCAA GGATCAGGCC
GACCGCACAC CGACCCCGCA ATGGGTGCGC GTGGTCGGCG GCTGGAACGA ATTCCAGTTC
GCCGAAAAAC GCATGCCGAC CCTCGAAGAA ATCAACCAGG CCGCGCCGGA CACCCCGGTG
TTCATCCTGC ACCTGTACGA CCGTGCGCTG CTCAACCGCG CCGCGCTGCG CGTGGCCGGC
TACACCCGCG ACACGCCGAA CCCGCCGGGT GGCGAGATCG TGCGCGATGC CAACGGCAAC
CCGACCGGCA TGCTGGTGGC GCGGCCGAAC GCGATGATTC TGTATTCGAC GCTGGCCAAG
GGGCCCAAGC TGCCGCTGGA GTATCAGGTC AACTCGACCC GCCAGTTCAT GCGCGAACTC
AATCGGCTCG GCCTGACCAG CGCCATCGAT GCCGGCGGCG GTTTCCAGAA CTATCCGGAC
GACTATCAGG TGATCGAGCA ACTGGCCAAA GACGACCAGT TGACCGTGCG CATCGCCTAC
AACCTGTTCA CCCAGAAGCC GAAAGAAGAG CTGACCGACT TCCAGAACTG GACCGGCAGC
GTCAAGTTGC ATCAGGGCGA TGACTTCCTG CGCCACAACG GCGCCGGGGA AATGCTGGTG
TTCTCGGCAG CGGACTTCGA AGACTTCCTC GAACCGCGCC CGGACCTGCC GCAGACCATG
GAACAGGAGC TTGAGCCGGT GGTGCGCCAC CTGGTCGAGC AGCGCTGGCC GTTCCGTCTG
CACGCCACCT ACAACGAATC GATCAGCCGC ATGCTCGACG TGTTCGAGAA GGTCAACCGC
GACATTCCGT TCAACGGTTT GCCGTGGTTC TTCGATCACG CCGAAACCAT CACCCCGCAG
AACATCGAGC GGGTGAGGGC GCTGGGCGGC GGCATTGCGA TCCAGGATCG CATGGCCTTT
CAGGGCGAAT ACTTCGTTGA CCGTTACGGC AAACAAGCCG CCGAAGCCAC GCCACCGATC
AAACGCATGC TCGCCGAAGG CGTGCCGGTC GGCGCGGGCA CCGATGCCAC TCGGGTGTCG
AGCTACAACC CGTGGACTTC GCTGTACTGG ATGGTCAGCG GTCGCACCGT TGGCGGTCTG
GCGCTGTACG AAGAAGGTTT GCCACGCAGC ACCGCGCTGG AACTGTTCAC CCATGGCAGC
GCCTGGTTCT CGTCCGAGCA GGGCAAGAAG GGCCAGATCA AGGTCGGGCA ACTGGCGGAC
CTGGCAGCGC TGAGCGCGGA CTTCTTCAGC GTCGAAGAAG AAGCGATCAA GTGGATCGAG
TCGGTCATGA CCGTGGTTGG CGGCAAGATC GTGTACGCCG CCGGCGACTT CGAAGACCTC
GGCCCACGTT CATTGCCGGT GCTGCCGGAC TGGTCGCCGG TAGTGAAAGT CCCTGGCCAC
TGGCGCCCGA ATTCGCCCTT GCAGGCCCAG GTGCACCAGT GCAGCGGCCC GTGCGCAGTG
CATACCCACA GCCATGAAAA AGCGCGGATG TCGAATGCGC CGGTCAGCGA TTTCGCCGGT
TTCTGGGGCG CGTTCGGCTG TTCCTGCTTC GCGTTCTGA
 
Protein sequence
MNADLILFNG QFHTVDREKP LASAVAIKDG RFVAVGNDAE AMALKGAGTQ VVDLKGRCVI 
PGLNDSHLHL IRGGLNYNLE LRWEGVPSLA DALRMLKDQA DRTPTPQWVR VVGGWNEFQF
AEKRMPTLEE INQAAPDTPV FILHLYDRAL LNRAALRVAG YTRDTPNPPG GEIVRDANGN
PTGMLVARPN AMILYSTLAK GPKLPLEYQV NSTRQFMREL NRLGLTSAID AGGGFQNYPD
DYQVIEQLAK DDQLTVRIAY NLFTQKPKEE LTDFQNWTGS VKLHQGDDFL RHNGAGEMLV
FSAADFEDFL EPRPDLPQTM EQELEPVVRH LVEQRWPFRL HATYNESISR MLDVFEKVNR
DIPFNGLPWF FDHAETITPQ NIERVRALGG GIAIQDRMAF QGEYFVDRYG KQAAEATPPI
KRMLAEGVPV GAGTDATRVS SYNPWTSLYW MVSGRTVGGL ALYEEGLPRS TALELFTHGS
AWFSSEQGKK GQIKVGQLAD LAALSADFFS VEEEAIKWIE SVMTVVGGKI VYAAGDFEDL
GPRSLPVLPD WSPVVKVPGH WRPNSPLQAQ VHQCSGPCAV HTHSHEKARM SNAPVSDFAG
FWGAFGCSCF AF