Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1957 |
Symbol | |
ID | 3716269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2231579 |
End bp | 2233051 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_347689 |
Protein GI | 77458184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCC TCAACGAATT GAACTCGGCG TCGGTCCTGC GTTTCGGGCC GTACGCCTTC CATTTGCGCC AACGGCTGAT CCTCGAAGGG GATCGGCAAT TGCGCATGGG CGGTCGTGCG CTGGACATTC TGCAAGTGCT GGTCGAGCGC GCCGGCCAGG TGGTCAGCAA AGAACAATTG ATCGCGCTGG TGTGGCCGAC CTCGGTGGTC GAGGAGATCA ACCTGCGGGT ACACATCGCC GCGCTGCGCA GGGCCCTCGG AGAGGGTGAA AACGGTCAGC GCTACATCGT CAATGTGCCG CAACGCGGGT ACAGCTTCGT GGCTCCGGTG CAGGGCGACA GCGTCACCCA AGTGGTGTTC GAAAACCTGC AAGCGCCCCA GCACAATTTG CCTGCACGAC TGACGCCGGT CACCGGGCGC GATTCACTGG TCGGCGGTCT GGTGCGGCAA CTGCCGTTGT CCCGGCTGCT GACGGTGACG GGGCCTGCCG GTGTCGGTAA GAGCACCGTG GCGCTGCGCG CAGCGGAACT GCTGCTGCAA CATTTTCGTG ACGGCGTGTG GCAGGTGGAT CTGTCGCTGA TCGATGAAAA CATCCCGCTC CTCGATCACT TGCTGAAAAC CCTCGACCTC GATTTCCCCA CTCTGGCAGC GCGCCATGCC TTGCTGGTGC TGGACAACTG CGATCACCTG CACCAAGCCT GCCGGAGCCT GCTGCAAACA TTGCTTGATG CCGCGCCCCG TCTGTCGATC CTTGCCACCA GCCGCGAGCC GTTGCGTCTC GCTCTGGAAG TCCTGCAGCC GCTGGCGCCC CTGACCCTTC CCAAAGCTTC GGCCCTCAAC AGTGTCGCCG AGGTCATGGG CTATTCGGCG GTGCAGCTGT TTGTCAGTCG TGCCCGCGCC CGTCAACACG GCTTCAGTCT GCGTGAGCAG GATCTGGAAA CGGTGCGCGA TATCTGTCGC CGGCTCGACG GTCTGCCGCT GGCGATCGAG TTGGCAGCCG CGCAGATCGA TGCGCTGGCG CTGGTCGGAT TGCAGACGCA ACTGGACCAA GGCCTGCAAG TCCTGAGTCA CGGTCGCCGC ACCGCCGTGC CGCGCCACCA GTCAATGAAG GCTGCGCTGG ACTGGAGCTA TCAACGCTTG AGCGAGCAGG AACAGCGCGT GCTGCAACGC TTGTCGGTGT TCAAGATGGC ATTCACCCTG GATGCCGCCA TCGGCGTGAT CAGTTGCGCG CAATTACCAC CCTCGACACT GGTGGCTGTG GTCGAACAGC TCGCGGCCAA GTCGTTGCTG ACCACAGATC GATCCAGCGG GACGCTGCGC TACCGAATGC TCAACATCAC GCGCCGCTAT GCCCGCGAAC AGCTGGAGCA GGGCGGCGAA CTCAATGATG TCGAGCGTCG GCACGCGCGT TACCTGGGCC GTACCCGACC CGTCTCAAGC GGCCGACTGA CCGCGCAGTT CGTCGAGCAG TAA
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Protein sequence | MNSLNELNSA SVLRFGPYAF HLRQRLILEG DRQLRMGGRA LDILQVLVER AGQVVSKEQL IALVWPTSVV EEINLRVHIA ALRRALGEGE NGQRYIVNVP QRGYSFVAPV QGDSVTQVVF ENLQAPQHNL PARLTPVTGR DSLVGGLVRQ LPLSRLLTVT GPAGVGKSTV ALRAAELLLQ HFRDGVWQVD LSLIDENIPL LDHLLKTLDL DFPTLAARHA LLVLDNCDHL HQACRSLLQT LLDAAPRLSI LATSREPLRL ALEVLQPLAP LTLPKASALN SVAEVMGYSA VQLFVSRARA RQHGFSLREQ DLETVRDICR RLDGLPLAIE LAAAQIDALA LVGLQTQLDQ GLQVLSHGRR TAVPRHQSMK AALDWSYQRL SEQEQRVLQR LSVFKMAFTL DAAIGVISCA QLPPSTLVAV VEQLAAKSLL TTDRSSGTLR YRMLNITRRY AREQLEQGGE LNDVERRHAR YLGRTRPVSS GRLTAQFVEQ
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