Gene Pfl01_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1957 
Symbol 
ID3716269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2231579 
End bp2233051 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_347689 
Protein GI77458184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC TCAACGAATT GAACTCGGCG TCGGTCCTGC GTTTCGGGCC GTACGCCTTC 
CATTTGCGCC AACGGCTGAT CCTCGAAGGG GATCGGCAAT TGCGCATGGG CGGTCGTGCG
CTGGACATTC TGCAAGTGCT GGTCGAGCGC GCCGGCCAGG TGGTCAGCAA AGAACAATTG
ATCGCGCTGG TGTGGCCGAC CTCGGTGGTC GAGGAGATCA ACCTGCGGGT ACACATCGCC
GCGCTGCGCA GGGCCCTCGG AGAGGGTGAA AACGGTCAGC GCTACATCGT CAATGTGCCG
CAACGCGGGT ACAGCTTCGT GGCTCCGGTG CAGGGCGACA GCGTCACCCA AGTGGTGTTC
GAAAACCTGC AAGCGCCCCA GCACAATTTG CCTGCACGAC TGACGCCGGT CACCGGGCGC
GATTCACTGG TCGGCGGTCT GGTGCGGCAA CTGCCGTTGT CCCGGCTGCT GACGGTGACG
GGGCCTGCCG GTGTCGGTAA GAGCACCGTG GCGCTGCGCG CAGCGGAACT GCTGCTGCAA
CATTTTCGTG ACGGCGTGTG GCAGGTGGAT CTGTCGCTGA TCGATGAAAA CATCCCGCTC
CTCGATCACT TGCTGAAAAC CCTCGACCTC GATTTCCCCA CTCTGGCAGC GCGCCATGCC
TTGCTGGTGC TGGACAACTG CGATCACCTG CACCAAGCCT GCCGGAGCCT GCTGCAAACA
TTGCTTGATG CCGCGCCCCG TCTGTCGATC CTTGCCACCA GCCGCGAGCC GTTGCGTCTC
GCTCTGGAAG TCCTGCAGCC GCTGGCGCCC CTGACCCTTC CCAAAGCTTC GGCCCTCAAC
AGTGTCGCCG AGGTCATGGG CTATTCGGCG GTGCAGCTGT TTGTCAGTCG TGCCCGCGCC
CGTCAACACG GCTTCAGTCT GCGTGAGCAG GATCTGGAAA CGGTGCGCGA TATCTGTCGC
CGGCTCGACG GTCTGCCGCT GGCGATCGAG TTGGCAGCCG CGCAGATCGA TGCGCTGGCG
CTGGTCGGAT TGCAGACGCA ACTGGACCAA GGCCTGCAAG TCCTGAGTCA CGGTCGCCGC
ACCGCCGTGC CGCGCCACCA GTCAATGAAG GCTGCGCTGG ACTGGAGCTA TCAACGCTTG
AGCGAGCAGG AACAGCGCGT GCTGCAACGC TTGTCGGTGT TCAAGATGGC ATTCACCCTG
GATGCCGCCA TCGGCGTGAT CAGTTGCGCG CAATTACCAC CCTCGACACT GGTGGCTGTG
GTCGAACAGC TCGCGGCCAA GTCGTTGCTG ACCACAGATC GATCCAGCGG GACGCTGCGC
TACCGAATGC TCAACATCAC GCGCCGCTAT GCCCGCGAAC AGCTGGAGCA GGGCGGCGAA
CTCAATGATG TCGAGCGTCG GCACGCGCGT TACCTGGGCC GTACCCGACC CGTCTCAAGC
GGCCGACTGA CCGCGCAGTT CGTCGAGCAG TAA
 
Protein sequence
MNSLNELNSA SVLRFGPYAF HLRQRLILEG DRQLRMGGRA LDILQVLVER AGQVVSKEQL 
IALVWPTSVV EEINLRVHIA ALRRALGEGE NGQRYIVNVP QRGYSFVAPV QGDSVTQVVF
ENLQAPQHNL PARLTPVTGR DSLVGGLVRQ LPLSRLLTVT GPAGVGKSTV ALRAAELLLQ
HFRDGVWQVD LSLIDENIPL LDHLLKTLDL DFPTLAARHA LLVLDNCDHL HQACRSLLQT
LLDAAPRLSI LATSREPLRL ALEVLQPLAP LTLPKASALN SVAEVMGYSA VQLFVSRARA
RQHGFSLREQ DLETVRDICR RLDGLPLAIE LAAAQIDALA LVGLQTQLDQ GLQVLSHGRR
TAVPRHQSMK AALDWSYQRL SEQEQRVLQR LSVFKMAFTL DAAIGVISCA QLPPSTLVAV
VEQLAAKSLL TTDRSSGTLR YRMLNITRRY AREQLEQGGE LNDVERRHAR YLGRTRPVSS
GRLTAQFVEQ