Gene Pfl01_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1955 
Symbol 
ID3716267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2229604 
End bp2230326 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content61% 
IMG OID 
ProductPirin-like 
Protein accessionYP_347687 
Protein GI77458182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC TTCGCAAAGC TTCCGACCGT GGTCTGGCCA ATCATGGCTG GTTGAAGTCG 
TTCCACACCT TTTCCTTCGC CAGCTACCGT GACCCGCGTG AACAGGGTTT CTCCGACCTG
CTGGTCATCA ACGATGACCG CGTCGCCGCT GGCAAAGGCT TCGGCCAGCA CCCGCACCGT
GACATGGAGA TTTTCTCCTA TGTGCTCGAA GGTGCGCTGG AACACAAGGA CACCCTCGGC
ACCGGTTCGG TGATCCGCCC CGGCGATGTG CAACTGATGA GCGCCGGCAG CGGCGTGGCC
CACAGCGAGT TCAACCACTC GGCAACCAAG CCGGTGCACT TTCTGCAGAT CTGGATCGTG
CCGGACGTCA GCGGCGCGAA ACCGCGTTAC CAGCAAGAGC ACTTCAGCGA ACAGAAAAAA
CGCGGTCGCC TGCAACTGAT CATTTCGCCC GAAGGCAGCC ACGGCTCGCT GAAAGTACGG
CAGGACGCAC GGGTGTATGC CGGACTGTTC GATGGCCAGG AAAGCGCGAC ACTCGAACTG
CCCGCCAACC GCTACGCCTA TGTGCACGTT GCTCGCGGCA GCGTTGAACT GAACGGCATG
CAGTTGAAGG AAGGCGACGG CGTAAGGGTT CGTGAAGAAC AGGCACTGAC CCTGAGCAAT
GGCCAGGATG CCGAAGTCCT GGTGTTTGAC CTGCGGCCGC AGGAACTGCC GGAAATGCCA
TGA
 
Protein sequence
MLTLRKASDR GLANHGWLKS FHTFSFASYR DPREQGFSDL LVINDDRVAA GKGFGQHPHR 
DMEIFSYVLE GALEHKDTLG TGSVIRPGDV QLMSAGSGVA HSEFNHSATK PVHFLQIWIV
PDVSGAKPRY QQEHFSEQKK RGRLQLIISP EGSHGSLKVR QDARVYAGLF DGQESATLEL
PANRYAYVHV ARGSVELNGM QLKEGDGVRV REEQALTLSN GQDAEVLVFD LRPQELPEMP