Gene Pfl01_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1953 
Symbol 
ID3716265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2227331 
End bp2228551 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347685 
Protein GI77458180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTT CAATTGCTTC GCCCGAACGT CCGGACACAA GTGTCTGGCT GGCGATCTTC 
GCCGGACTCT GCGCCAGCCT GGTCAGCATC GGTCTGGCGC GTTTCGCCTA CACACCGCTG
ATCCCTTCGC TGATTCAGGC GCAGTGGTTT TCCGCCCATG ATGTGGTCTA TCTCGGCGCG
GCCAATCTGG TCGGTTACCT GATCGGCGCC CTCCTCGGCC GCCCGCTGGC ACGCCGGCTT
ACCCAGAGAA ACGCTCTGCG CCTGATGATG CTGGCGGTGA CCGTGGCGTT TTTTGCCTGT
GCGTACCCCG TGTCGGTGAG TTGGTATTTC GGCTGGCGCC TGCTGTCGGG AATCGCGGGC
GGCGCGATCA TGGTGCTGGT GGCTGCGACT GTATTGCCCC ATGTACCGGC CGCGCGCAAA
GGCCTGGCCA GTGGGGCGAT TTTCCTCGGC ATCGGTCTGG GCATCGCCGG CTCGGGCACG
ATCGTTCCGC TGCTGTTGAG CCTGGGCTTG CAAGCAACGT GGCTGGGATT GGGCGCTTTG
TCGCTGGCAC TGACGGCATT GAGCTGGTTC GGCTGGCCCT CGGAGCTGCC CCATGCAACC
ACCGCAACGG CTCAGGTGGA ACCGGTCGAG CCGACACCGC CCGCTGTTTA TCTGCTGTTT
GCCCAGTACG CATTCATGGC TGCCGGGCTG GTACCGGCCA TGGTCTTTCT GGTGGATTAC
GTCGCCCGTG GCCTGGGCGC CGGGGCGCAC GTCGGCGCGC TGATCTGGGT CATGTACGGT
CTGGGCGCCA TCGTCGGCCC GGTGAGTTAT GGCTTTCTCG CCGACCACCT CGGCGCGCGG
ACCGGCATTC GTGTGGTGCT GGTGGTGCAG GCGATCACCC TGGGTTTGCT GGCGGTTTCG
CATTCGTTCC TGGCGTTGGC GCTGCTGGCG GTGGTCCTCG GTTCCTTTCC ACCGGGCATT
GTGCCGCTGG CATTGGCTCG GGTGCATGAG CTGGTGCCGG ATCACCATCG CCAACAGGTG
GCGTGGAGCC GGGCCACAGT GTCGTTCGCC ACGTTTCAGG CGCTGGCCGG GTTCGCCTAT
TCGGCGCTGT TCAACGCCAC GGGCGGACAG CATGTGTTGC TCTTCGTGAT AGCCGGCGGT
GCCATCTTGA TCGCTCTGAT ACTTGAGTAC GCCATGAAAT TGCTGCCCTC CTCCGTCGAA
CAACGCTGCT GCGCCGAATG A
 
Protein sequence
MHTSIASPER PDTSVWLAIF AGLCASLVSI GLARFAYTPL IPSLIQAQWF SAHDVVYLGA 
ANLVGYLIGA LLGRPLARRL TQRNALRLMM LAVTVAFFAC AYPVSVSWYF GWRLLSGIAG
GAIMVLVAAT VLPHVPAARK GLASGAIFLG IGLGIAGSGT IVPLLLSLGL QATWLGLGAL
SLALTALSWF GWPSELPHAT TATAQVEPVE PTPPAVYLLF AQYAFMAAGL VPAMVFLVDY
VARGLGAGAH VGALIWVMYG LGAIVGPVSY GFLADHLGAR TGIRVVLVVQ AITLGLLAVS
HSFLALALLA VVLGSFPPGI VPLALARVHE LVPDHHRQQV AWSRATVSFA TFQALAGFAY
SALFNATGGQ HVLLFVIAGG AILIALILEY AMKLLPSSVE QRCCAE