Gene Pfl01_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1948 
Symbol 
ID3716260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2223145 
End bp2224173 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID 
ProductRNA 3'-terminal-phosphate cyclase 
Protein accessionYP_347680 
Protein GI77458175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG ACGTGATTGA ACTGGACGGC GCCATCGGCG GTGGCCAGGT GTTGCGCAGT 
GCGCTGAGTC TGTCGATGGT GACGGGCCAG GCGTTTCGAA TAGTGCGGAT TCGGGCCCGG
CGCAGTCGTC CCGGCCTGTT GCGCCAGCAC CTGACCGCCG TGATGGCGGC GGCGCAGGTC
TGCGGTGCAA AGATCCAGGG GGCTGAACTG GGCTCGCAGA CATTGAGCTT CGAGCCGGGG
CCGATTCGTG GCGGCGATTA TCGCTTTGCC ATTGGCACCG CCGGCAGTTG CACCCTGGTG
TTGCAGACCT TGCTGCCCGC CTTGTTACTG GCGCCGCAAG CCAGCCGCGT GCGGATCAGC
GGCGGCACGC ATAATCCGCT GGCGCCACCG ACCGATTTTC TCAGCCGCAG CTGGTTGCCG
CTGCTGCGAC GGATGGGCGC GGAGGTTGAA CTGACGTTGC TGCGCCACGG GTTTGTACCG
GCCGGCGGCG GTGAAATTGA CGTCAGGGTG CAACCATCGA AACTGTCAGC ACTGCACCTG
TGTGAGCGCG GCTTGCCGCT CTCGCAACAG GCGTTTGCGC TAACGGCCGG ACTGGCGCCG
AGTGTCGGTG TCCGCGAGCT CGAAAGGGTG GCCCAGCGAT TGAACATGGC GTCAGCAGAA
TTGAACACCG TCATCCTTGA TCCGGCCTGT GGCCCGGGCA ATGTGCTGCT GCTGGAATAT
TCGTTCGAAC ACGTCACGGA GGTTTTCAGC GCTTTCGGTC AAGCCTCACT GCGTTCGGAG
AAGGTTGCGG ACGCCGCGAT CGATCAAGCG ACCGATTGGC TGCACAGCGG TGCGGCGGTG
GCAGAGCATC TGGCCGACCA GTTGCTGTTG CCGATGGTGC TGGCCGGAGG TGGATCGTTC
ACCACACCCA GGATGACCGA GCATTTGCAC AGCAACATTT TGGTCATCGA GCGTTTTGTA
CCGATAACGA TCCAGTGTGA GGAAGAAGGT GCAGACCGGT TGAGGGTTGA AGTTCGAACC
AAGGAGTAA
 
Protein sequence
MKQDVIELDG AIGGGQVLRS ALSLSMVTGQ AFRIVRIRAR RSRPGLLRQH LTAVMAAAQV 
CGAKIQGAEL GSQTLSFEPG PIRGGDYRFA IGTAGSCTLV LQTLLPALLL APQASRVRIS
GGTHNPLAPP TDFLSRSWLP LLRRMGAEVE LTLLRHGFVP AGGGEIDVRV QPSKLSALHL
CERGLPLSQQ AFALTAGLAP SVGVRELERV AQRLNMASAE LNTVILDPAC GPGNVLLLEY
SFEHVTEVFS AFGQASLRSE KVADAAIDQA TDWLHSGAAV AEHLADQLLL PMVLAGGGSF
TTPRMTEHLH SNILVIERFV PITIQCEEEG ADRLRVEVRT KE