Gene Pfl01_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1939 
Symbol 
ID3716289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2208235 
End bp2209443 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content53% 
IMG OID 
ProductDNA helicase-related protein 
Protein accessionYP_347671 
Protein GI77458166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA TCGTTCAGCC TCTTACGCCT CAAGACGACG GTCAGCCTAA AGAAGTAAAA 
ATCCTTGCCA CCTTGGTGGC AAAGCTGAAC CTTGCAGATT TTCAGAACGC TATCCCTGTG
ATTCGCGAGC TTAGCATCTC GAATGAGACA AGCGATCGTT TCGTCAATGC CACTCTTACC
CTTAGCTCGG CACCTGAGGT ATTTAAGTCC AAAATCTGGC GGATTGACGA GATCGCTGCA
GATAGCTTCC GAGTCATACC TGGTCTTGAT CTTGTCTTGG ACGGCCCGTT ATTGAGTCGC
CTGACAGAAG CAGAGATGTC GACATTTACG TTCGTCCTTG AAGCCGATGA CAAGGAGGCG
GAGAGCGGTC GCAAGGAAGT TGCTCGGTTT GAACAGATCG TAGACCTTCT GCCCAGAAAC
CAGTGGGGCG GATTGCGTCA TATACCAGAT ATGACGGCGG CTTTTGTTCA GCCGAATGAT
GCGGCGGTAG AAAGGTTGCT CAAACAGGCG GCCGAGTTGC TTCGTCTAAG CGAGAAACCA
TCCGCACTTG ATGGATATGA AGGTGGCCCC AAAAGAGCTT GGCAGTTGGC GTCGGCAGTA
TGGGGCGCGG TGGCGCGCAT GAAGCTCGAC TATGCGTTGC CGCCTGCTAG CTTCGAACAA
TCAGGACAGA AGATTCGTAG CCCCAGTCAG ATTGCTGACT CCGGGTTGGC TACCTGTCTC
GACCTTACTC TGCTTTTCTG TGCGGCATTG GAGCAGATCG GTCTTAACCC TGTGATCGTA
TTCACCCATG GTCATGCTTT TGCTGGTTTG TGGCTCAAGC CCGAAGAGTT TACGACTGCC
CTGGTGGATG ATGTCACTGC AGTACGTAAG CGGGTGAAGC TTCAGGAACT CGTGCTATTC
GAGACCACCC TCATTACCCA CAACTCAATA CCGCCATTCT CTTATGCGGT AGAGATGGGC
ACGAAACAGG TAGCCGAAGA CGCTGAAAGT GTTTTCGAGA TGCTGCTGGA TATCCGTCGC
GCCCGTCTGC AACGTATCAA GCCACTCGCC AGCTCAGAGG CTCAGATCGC GCGTGTTGCC
GTTGCTGAAT CTGATGAAGC CCCCTCGCTT CTGGTGGAAG AAGGGATAGG CATCGCCGAT
GACAACATTG AGGTGCAGGT TGAGGATCTC TCCAAGCTCG ATCCAGCAGA TCGCCTCGGC
CGTTGGTAG
 
Protein sequence
MDDIVQPLTP QDDGQPKEVK ILATLVAKLN LADFQNAIPV IRELSISNET SDRFVNATLT 
LSSAPEVFKS KIWRIDEIAA DSFRVIPGLD LVLDGPLLSR LTEAEMSTFT FVLEADDKEA
ESGRKEVARF EQIVDLLPRN QWGGLRHIPD MTAAFVQPND AAVERLLKQA AELLRLSEKP
SALDGYEGGP KRAWQLASAV WGAVARMKLD YALPPASFEQ SGQKIRSPSQ IADSGLATCL
DLTLLFCAAL EQIGLNPVIV FTHGHAFAGL WLKPEEFTTA LVDDVTAVRK RVKLQELVLF
ETTLITHNSI PPFSYAVEMG TKQVAEDAES VFEMLLDIRR ARLQRIKPLA SSEAQIARVA
VAESDEAPSL LVEEGIGIAD DNIEVQVEDL SKLDPADRLG RW