Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1939 |
Symbol | |
ID | 3716289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2208235 |
End bp | 2209443 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | DNA helicase-related protein |
Protein accession | YP_347671 |
Protein GI | 77458166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACA TCGTTCAGCC TCTTACGCCT CAAGACGACG GTCAGCCTAA AGAAGTAAAA ATCCTTGCCA CCTTGGTGGC AAAGCTGAAC CTTGCAGATT TTCAGAACGC TATCCCTGTG ATTCGCGAGC TTAGCATCTC GAATGAGACA AGCGATCGTT TCGTCAATGC CACTCTTACC CTTAGCTCGG CACCTGAGGT ATTTAAGTCC AAAATCTGGC GGATTGACGA GATCGCTGCA GATAGCTTCC GAGTCATACC TGGTCTTGAT CTTGTCTTGG ACGGCCCGTT ATTGAGTCGC CTGACAGAAG CAGAGATGTC GACATTTACG TTCGTCCTTG AAGCCGATGA CAAGGAGGCG GAGAGCGGTC GCAAGGAAGT TGCTCGGTTT GAACAGATCG TAGACCTTCT GCCCAGAAAC CAGTGGGGCG GATTGCGTCA TATACCAGAT ATGACGGCGG CTTTTGTTCA GCCGAATGAT GCGGCGGTAG AAAGGTTGCT CAAACAGGCG GCCGAGTTGC TTCGTCTAAG CGAGAAACCA TCCGCACTTG ATGGATATGA AGGTGGCCCC AAAAGAGCTT GGCAGTTGGC GTCGGCAGTA TGGGGCGCGG TGGCGCGCAT GAAGCTCGAC TATGCGTTGC CGCCTGCTAG CTTCGAACAA TCAGGACAGA AGATTCGTAG CCCCAGTCAG ATTGCTGACT CCGGGTTGGC TACCTGTCTC GACCTTACTC TGCTTTTCTG TGCGGCATTG GAGCAGATCG GTCTTAACCC TGTGATCGTA TTCACCCATG GTCATGCTTT TGCTGGTTTG TGGCTCAAGC CCGAAGAGTT TACGACTGCC CTGGTGGATG ATGTCACTGC AGTACGTAAG CGGGTGAAGC TTCAGGAACT CGTGCTATTC GAGACCACCC TCATTACCCA CAACTCAATA CCGCCATTCT CTTATGCGGT AGAGATGGGC ACGAAACAGG TAGCCGAAGA CGCTGAAAGT GTTTTCGAGA TGCTGCTGGA TATCCGTCGC GCCCGTCTGC AACGTATCAA GCCACTCGCC AGCTCAGAGG CTCAGATCGC GCGTGTTGCC GTTGCTGAAT CTGATGAAGC CCCCTCGCTT CTGGTGGAAG AAGGGATAGG CATCGCCGAT GACAACATTG AGGTGCAGGT TGAGGATCTC TCCAAGCTCG ATCCAGCAGA TCGCCTCGGC CGTTGGTAG
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Protein sequence | MDDIVQPLTP QDDGQPKEVK ILATLVAKLN LADFQNAIPV IRELSISNET SDRFVNATLT LSSAPEVFKS KIWRIDEIAA DSFRVIPGLD LVLDGPLLSR LTEAEMSTFT FVLEADDKEA ESGRKEVARF EQIVDLLPRN QWGGLRHIPD MTAAFVQPND AAVERLLKQA AELLRLSEKP SALDGYEGGP KRAWQLASAV WGAVARMKLD YALPPASFEQ SGQKIRSPSQ IADSGLATCL DLTLLFCAAL EQIGLNPVIV FTHGHAFAGL WLKPEEFTTA LVDDVTAVRK RVKLQELVLF ETTLITHNSI PPFSYAVEMG TKQVAEDAES VFEMLLDIRR ARLQRIKPLA SSEAQIARVA VAESDEAPSL LVEEGIGIAD DNIEVQVEDL SKLDPADRLG RW
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