Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1934 |
Symbol | rplT |
ID | 3716283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2203220 |
End bp | 2203576 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | 50S ribosomal protein L20 |
Protein accession | YP_347666 |
Protein GI | 77458161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000268188 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTG TAAAGCGTGG CGTCATTGCC CGTAAACGTC ACAAAAAAAT TCTGAAACTT GCTAAAGGCT ACTACGGCGC ACGCTCCCGC GTATTCCGTG TTGCCAAGCA AGCGGTAATC AAGGCAGGCC AATACGCCTA CCGTGACCGT CGTCAGAAAA AACGTCAGTT CCGCGCTCTG TGGATCGCTC GTATCAACGC TGGTGCTCGT GTTAACGGTC TGTCCTACAG CCGTTTCATC GCTGGCCTGA AAAAAGCGTC CATCGAGATC GACCGTAAGG TTCTGGCTGA TCTGGCAGTG AACGAAAAAG CGGCGTTTGC TGCGATTGTC GAGAAAGCTA AAGCCACCTT GGCTTAA
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Protein sequence | MARVKRGVIA RKRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQKKRQFRAL WIARINAGAR VNGLSYSRFI AGLKKASIEI DRKVLADLAV NEKAAFAAIV EKAKATLA
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