| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1924 |
|---|
| Symbol | |
|---|
| ID | 3716310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2196572 |
|---|
| End bp | 2196976 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | D-ribose pyranase |
|---|
| Protein accession | YP_347656 |
|---|
| Protein GI | 77458151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.102223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CTCCTTTGCT CAATGTCGCC CTGTCGCGGC TGATTGCCTC CCTCGGCCAC
GGCGACGTGG TCGTGATCGG TGATGCCGGC CTGCCGGTGC CGCCGGGTGT CGAGCTGATC
GACCTAGCGT TGACGCACGG CGTGCCGGAT TTCGTCAGCA CCCTGAAAGT CGTGCTCAGC
GAGATGCAGG TGGAAAGCCA CGCGCTGGCC AAGGAGATTT TCGACAAGCA ACCGACCGCG
CTGTCCACGC TGGACGAGCT GAATGACGAA GGCTCGCTGG GGCGGCGTGA CCTGCTCAGT
CACGAGCAAT TCAAAGTACT CAGCCGACAG GCACGAGCGA TTGTTCGTAC GGGAGAATGC
CAGCCGTACT GCAACATCGT GCTGGTGGCT GGGGTTACGT TCTAA
|
|---|
| Protein sequence | MKKTPLLNVA LSRLIASLGH GDVVVIGDAG LPVPPGVELI DLALTHGVPD FVSTLKVVLS
EMQVESHALA KEIFDKQPTA LSTLDELNDE GSLGRRDLLS HEQFKVLSRQ ARAIVRTGEC
QPYCNIVLVA GVTF
|
|---|
| |