Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1922 |
Symbol | |
ID | 3716308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2194615 |
End bp | 2195634 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | LacI family transcription regulator |
Protein accession | YP_347654 |
Protein GI | 77458149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.704174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGA TCAAGGATGT GGCGGCACTT GCAGGAATTT CCTACACGAC TGTGTCCCAC GTAGTAAACA AGACCCGACC GGTGAGCGAA GAAGTGCGGC TCAAGGTCGA GGCGGCAATC AAGAGTCTCG ACTATGTGCC GAGCGCCGTG GCCCGGTCGC TGAAAGCGAA AACCACCGCC ACCATCGGTT TGCTGGTGCC CAACAGCCTC AACCCATACT TCGCCGAACT GGCGCGCGGG ATCGAGGATT ACTGCGAGCG TAACGGTTAC TGCGTGATTC TCTGCAACTC CGACGACAAC CCGGACAAGC AGCGCAGCTA CCTGCGGGTC CTGTTGGAAA AACGCATCGA CGGCTTGATC GTCGCCTCGG CGGGTGGCGA CAGCGGTCTG GCGCAAGGGT TGGCGGGTGT AAAGACGCCG ATGGTGATCG TCGACCGTGG GCTCGAAGGC GTGGATGCCG ACCTGGTGCG CATTGATCAC GAATATGGCG CGTACCTCGC GACGCGGCAT CTGCTCGAGC TCGGTCATCG CGATATCGCC ACGATCGGTG GTCCGGCCAG CACCAGTGTT GCGCAAATGC GTCAGGCCGG TTTTGCTCGA GCGCTGAAAG AGGCCGGTGT TGAAGTGGCC CCGTCGCGCA TGCTGGAAAG CGACTTCACC AGCACTGGCG GTTACAACGC TGCTTCCATC CTGCTTGAAC GTAACCCGCC GAGCGCGATT TTTGCCGGTA ACGACATGAT CGGCATTGGT GTGCTGCGGG CGGCGGCAGA GCGCAACGTG CGCGTGCCCG CCGAGTTGTC GGTGATCGGT TTCGACGATA TCCAGATGAG TCGTTACGTG TATCCCGCGC TGACGACCGT GGGCCAGTCG ATCCTGCAAT TGGGCGAGAT GGCCGCGGAA GTTCTGTTGC GAAGAATTGC CACCCCGGAT CTGGCGACGG ATCAGCGGAT CGTGACCCCG AGTATTGTCC TGCGCGAATC GACTGCACCG CTGTCCGGCG TGTTCACCGA ATACCGCTGA
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Protein sequence | MATIKDVAAL AGISYTTVSH VVNKTRPVSE EVRLKVEAAI KSLDYVPSAV ARSLKAKTTA TIGLLVPNSL NPYFAELARG IEDYCERNGY CVILCNSDDN PDKQRSYLRV LLEKRIDGLI VASAGGDSGL AQGLAGVKTP MVIVDRGLEG VDADLVRIDH EYGAYLATRH LLELGHRDIA TIGGPASTSV AQMRQAGFAR ALKEAGVEVA PSRMLESDFT STGGYNAASI LLERNPPSAI FAGNDMIGIG VLRAAAERNV RVPAELSVIG FDDIQMSRYV YPALTTVGQS ILQLGEMAAE VLLRRIATPD LATDQRIVTP SIVLRESTAP LSGVFTEYR
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