| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1921 |
|---|
| Symbol | |
|---|
| ID | 3716307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2193634 |
|---|
| End bp | 2194611 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_347653 |
|---|
| Protein GI | 77458148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.354392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG CATCTTCCGC CGGCAAATCC AGTGGCAATT TCTACGGCCT CGGCACTTAT
CTGGGCCTCG CCGGCGCATT GCTGGCAATG ATTGCGCTGT TCTCGGTCAT GAGCAGCCAT
TTCCTGTCAT ATAACACCTT CAGCACCCTG GCCAACCAGA TTCCCGACCT GATGGTGCTG
GCGGTGGGCA TGACGTTCGT CCTGATCATC GGCGGGATCG ACCTGTCGGT AGGCTCGGTG
CTGGCACTCG CGGCATCTAC TGTCAGCGTG GCGATTCTTG GCTGGGGTTG GAGCGTATTG
CCGGCGGCCT TGCTGGGTAT GGCAGTCGCG GCGTTGGCCG GCACGGTTAC CGGCTCGATT
ACCGTGGCGT GGCGAATTCC GTCGTTCATC GTATCTCTGG GTGTTCTGGA GATGGCCCGT
GGTCTGGCCT ATCAGATGAC CGGTTCGCGC ACGGCCTACA TCGGTGATTC CTTCGCCTGG
CTGTCGAACC CGATCGCCTT CGGCATTTCG CCGTCGTTCA TCATTGCCTT GCTGGTCATC
TTTATTGCCC AGGTCGTTCT GACCCGTACC GTGTTCGGTC GCTACCTGAT CGGCATTGGC
ACCAACGAAG AAGCGGTGCG TCTGGCGGGG ATCAATCCAA AACCCTACAA GATCCTGGTG
TTCAGTCTGA TGGGCTTGCT CGCGGGCATT GCGGCGCTGT TCCAGATTTC CCGGCTGGAA
GCGGCCGACC CGAATGCTGG TTCAGGCCTT GAGCTGCAAG TCATCGCTGC GGTGGTGATC
GGCGGTACCA GCCTGATGGG CGGCCGTGGT TCGGTGATCA GCACCTTTTT CGGTGTGTTG
ATCATCTCCG TGCTGGCGGC CGGTCTGGCG CAGATTGGCG CGACCGAGCC GACCAAGCGC
ATCATCACCG GTGCGGTGAT CGTGATCGCC GTGGTGCTCG ACACCTATCG CAGTCAACGC
GCAAGCCGAC GGGGCTGA
|
|---|
| Protein sequence | MKTASSAGKS SGNFYGLGTY LGLAGALLAM IALFSVMSSH FLSYNTFSTL ANQIPDLMVL
AVGMTFVLII GGIDLSVGSV LALAASTVSV AILGWGWSVL PAALLGMAVA ALAGTVTGSI
TVAWRIPSFI VSLGVLEMAR GLAYQMTGSR TAYIGDSFAW LSNPIAFGIS PSFIIALLVI
FIAQVVLTRT VFGRYLIGIG TNEEAVRLAG INPKPYKILV FSLMGLLAGI AALFQISRLE
AADPNAGSGL ELQVIAAVVI GGTSLMGGRG SVISTFFGVL IISVLAAGLA QIGATEPTKR
IITGAVIVIA VVLDTYRSQR ASRRG
|
|---|
| |