Gene Pfl01_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1915 
Symbol 
ID3716301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2187831 
End bp2188520 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID 
Productdeoxyribonuclease I 
Protein accessionYP_347647 
Protein GI77458142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.468697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC GTTTTGCTGC TGTGCTGTTG CTGTTCATTT CCCTGGGTGC GCAAGCTGGC 
GCGCCGCGTA CGTTCACCGA GGCCAAGAAG GTCGCCTGGA AGCTGTACGC TCCACAATCC
ACCGAGTTTT ATTGCGGGTG CAAATACACT GGCAACAAGG TCGATCTGGC CGCCTGCGGC
TACGTCCCAC GCAAGAACGC CAAGCGGGCG TCCCGCATTG AATGGGAGCA CATCGTTCCG
GCCTGGCAGT TCGGCCATCA ACGTCAATGC TGGCAGGAAG GCGGTCGCAA GAATTGCGCC
CGCTACGACC CGAGCTATCA GAAAGCCGAA GCCGACCTGC ACAACCTGGT GCCGAGCATT
GGCGAGGTGA ATGGCGACCG CAGCAATTTC AGCTATGGCT GGCTGCCGGT CGAAAAGGGT
CAGTACGGCT CATGCCTGAC TCAAGTCGAC TTCAAGGCGA AGAAGGTCAT GCCCCGCCCT
TCGATTCGCG GCATGATCGC CCGCACCTAC TTTTACATGA GCAAACAGTA CGGCTTGCGC
TTGTCGAAGC AGGATCGCCA ACTGTACGAA GCCTGGGACA AGACTTATCC GGTGCAAGAC
TGGGAACGTC AACGCAACCA GAGCGTGGCG TGCGTGATGG GACGCGGCAA CGAGTTTGTC
GGTCCGGTGA ACCTGAAATC CTGCGGTTGA
 
Protein sequence
MILRFAAVLL LFISLGAQAG APRTFTEAKK VAWKLYAPQS TEFYCGCKYT GNKVDLAACG 
YVPRKNAKRA SRIEWEHIVP AWQFGHQRQC WQEGGRKNCA RYDPSYQKAE ADLHNLVPSI
GEVNGDRSNF SYGWLPVEKG QYGSCLTQVD FKAKKVMPRP SIRGMIARTY FYMSKQYGLR
LSKQDRQLYE AWDKTYPVQD WERQRNQSVA CVMGRGNEFV GPVNLKSCG