Gene Pfl01_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1909 
Symbol 
ID3716329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2182832 
End bp2184115 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content62% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_347641 
Protein GI77458136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.275266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CCCCTTACCC AGAGTCTTAT TACGCTGCGT CGGCCAACGC CGTACCACCA 
CGCCCTGCCC TGCAGGATGA CGTGGAGACG GATGTCTGTG TGATCGGCGC TGGTTATACG
GGACTCTCCT CGGCCCTGTT CCTGCTGGAG AACGGTTTTC GCGTGACCGT GCTGGAAGCC
GCCAAGGTCG GTTTCGGCGC TTCGGGGCGC AATGGCGGGC AAATCGTCAA CAGCTACAGC
CGTGACATCG ATGTGATCGA ACGCAGCGTC GGCCCGAAGC AGGCGCAACT GCTCGGGCAG
ATGGCGTTCG AAGGCGGCCG GATCATTCGT GAGCGCGTCA GCAAGTACAA CATTCAGTGC
GACTTGAAGG ACGGTGGCGT ATTCGCCGCC CTCACCGCCA AGCAAATGGG CCACCTGGAA
TCGCAGAAGC GCTTGTGGGA ACGCTTCGGC CATACCCAAC TGGAACTGCT CGATCAACGC
CGCATCCGCG AAGTGGTGGC TTGTGACCAA TATGTCGGTG GCATGCTCGA CATGAGCGGC
GGCCACATCC ACCCGCTTAA CCTGGCGCTG GGCGAAGCCG CCGCTGTGGA ATCCCTGGGC
GGCACCATCC ATGAACAGTC GCCGGCCGTG CGCATCGAAC GCGGCGCCAA CCCGGTCGTG
CATACACCGC AGGGCAAGGT CCGAGCCAAA TTCATCATCG TTGCCGGCAA CGCCTACCTC
GGCAATCTGA TGCCGGAACT GGCGGCCAAA TCGATGCCGT GCGGCACTCA GGTCATCACC
ACCGAACCGC TCGGCGATGA ACTGGCGAAA TCCTTGCTGC CGCAGGACTA CTGCGTAGAA
GACTGCAATT ACCTGCTCGA CTACTACCGC CTCACCGGCG ACAAACGCCT GATCTTCGGC
GGCGGCGTGG TATATGGCGC GCGGGATCCG GCAAACATCG AAGCGATCAT CCGCCCGAAA
ATGCTCAAGG CCTTCCCGCA GCTCAAGGAC GTGAAAATCG ACTACGCCTG GACCGGCAAT
TTCCTGCTGA CCCTGTCGCG CCTGCCTCAG GTCGGACGTC TGGGCGACAA CATCTATTAT
TCTCAAGGCT GCAGTGGCCA CGGCGTGACC TATACACACC TGGCCGGCAA GGTACTGGCC
GAGGCTCTGC GCGGACAAGC CGAGCGTTTC GATGCGTTTG CCGACCTGCC GCACTACCCG
TTCCCCGGCG GGCAACTGCT GCGCACACCG TTTGCCGCAC TGGGCGCGTG GTACTACGGA
CTGCGCGACA AGCTCGGTTT CTGA
 
Protein sequence
MANTPYPESY YAASANAVPP RPALQDDVET DVCVIGAGYT GLSSALFLLE NGFRVTVLEA 
AKVGFGASGR NGGQIVNSYS RDIDVIERSV GPKQAQLLGQ MAFEGGRIIR ERVSKYNIQC
DLKDGGVFAA LTAKQMGHLE SQKRLWERFG HTQLELLDQR RIREVVACDQ YVGGMLDMSG
GHIHPLNLAL GEAAAVESLG GTIHEQSPAV RIERGANPVV HTPQGKVRAK FIIVAGNAYL
GNLMPELAAK SMPCGTQVIT TEPLGDELAK SLLPQDYCVE DCNYLLDYYR LTGDKRLIFG
GGVVYGARDP ANIEAIIRPK MLKAFPQLKD VKIDYAWTGN FLLTLSRLPQ VGRLGDNIYY
SQGCSGHGVT YTHLAGKVLA EALRGQAERF DAFADLPHYP FPGGQLLRTP FAALGAWYYG
LRDKLGF