Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1903 |
Symbol | |
ID | 3716320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2174331 |
End bp | 2175542 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_347635 |
Protein GI | 77458130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG AATGGGATGC CGGTCGGCTG GACAGCGACC TCGAAGGCGT AGCGTTCGAT ACCCTGGCCG TACGTGCCGG TCAGCACCGT ACGCCGGAAG GCGAGCACGG TGATCCGATG TTCTTCACTT CCAGCTATGT GTTTCGCACC GCCGCCGATG CGGCTGCGCG GTTTGCCGGG GAAGTGCCGG GCAACGTCTA CTCGCGTTAC ACCAACCCGA CCGTTCGCGC CTTCGAAGAG CGCATTGCCG CGCTGGAAAG CGCCGAGCAG GCGGTGGCCA CGGCCACCGG CATGGCCGCG ATCATGGCTG TGGTGATGAG CCTGTGCAGC GCCGGCGACC ATGTGCTGGT GTCGCGCAGT GTGTTCGGTT CGACCATCAG CCTGTTCGAG AAGTATTTCA AGCGTTTTGG CGTGGAAGTC GATTACGTGC CGCTGGCCGA TCTGTCGGCC TGGGGCGCAG CGATCAAGTC CAACACCAAA TTGCTGTTCG TCGAGTCGCC GTCCAATCCG TTGGCTGAAC TGGTGGATAT CACCGCTCTG TCGGAAATCG CGCACGCCAA GGGTGCGATG CTGGTAGTCG ACAACTGCTT CTGCACGCCT GCCTTGCAGC AGCCGCTGAA GCTGGGCGCA GACATCGTTG TGCATTCGGC CACCAAGTTC ATCGATGGCC AGGGCCGTTG CATGGGCGGC GTGGTTGCCG GTCGCAGCGA ACAGATGAAA GAAGTCGTCG GCTTCCTGCG TACCGCCGGG CCGACCCTCA GCCCGTTCAA CGCCTGGATC TTCCTCAAGG GGCTGGAAAC CCTGAACCTG CGGATGAAGG CGCACTGCGC CAATGCCCAA CAACTGGCTG AGTGGCTGGA GCAGCAGGAT GGCATCGAGA AGGTGCATTA CGCCGGTCTC AAGAGCCATC CGCAGCACGA ACTGGCTCAG CGTCAGCAGA AGGGCTTCGG CGCGGTGGTG AGCTTTGAGG TCAAGGGCGG CAAAGAGGGT GCCTGGCGTT TCATCGATGC GACCCGTTTG ATCTCGATTA CTGCCAACCT CGGTGACAGC AAAACCACCA TCACCCACCC GAGCACCACG TCCCATGGCC GTCTGGCGCC GCAGGAGCGT GAGGCAGCCG GCATTCGTGA CAGCCTGATC CGCATCGCGG TCGGTCTGGA AGACGTGGCT GACCTGCAAG CCGACCTGTC GCGCGGTCTG GCGGCGTTGT GA
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Protein sequence | MSQEWDAGRL DSDLEGVAFD TLAVRAGQHR TPEGEHGDPM FFTSSYVFRT AADAAARFAG EVPGNVYSRY TNPTVRAFEE RIAALESAEQ AVATATGMAA IMAVVMSLCS AGDHVLVSRS VFGSTISLFE KYFKRFGVEV DYVPLADLSA WGAAIKSNTK LLFVESPSNP LAELVDITAL SEIAHAKGAM LVVDNCFCTP ALQQPLKLGA DIVVHSATKF IDGQGRCMGG VVAGRSEQMK EVVGFLRTAG PTLSPFNAWI FLKGLETLNL RMKAHCANAQ QLAEWLEQQD GIEKVHYAGL KSHPQHELAQ RQQKGFGAVV SFEVKGGKEG AWRFIDATRL ISITANLGDS KTTITHPSTT SHGRLAPQER EAAGIRDSLI RIAVGLEDVA DLQADLSRGL AAL
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