Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1896 |
Symbol | truA |
ID | 3716347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2167466 |
End bp | 2168290 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_347628 |
Protein GI | 77458123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCCG AAGGCTTTTT CCGCGTCGCG CTGGGCGTTG AATACAAGGG CTCGCGCTAC AGCGGCTGGC AGCGTCAGTC CACCGGTGTG CTCACCGTGC AGGAAACCCT GGAAAAAGCC CTGTCGAAGG TCGCCGACTC GCCGATCTCG CTGCAATGCG CGGGGCGCAC CGACGCCGGT GTGCATGCGT GCGGGCAAGT GGTGCATTTC GATACCCAGG TCGACCGCTC GCTGAAAGCC TGGGTCATGG GCGCCAACAT CAATCTGCCC CACGACATCA GCGTCAGTTG GGCGAAGATC ATGCCGGCGC ATTTCCATGC GCGATTCAAG GCGATTGCCC GGCGCTATCG CTATGTGATC TACAACGATC AGATCCGCCC GGCGCATCTC AACGAAGAAA TCACCTGGAA TCACCGTCCG CTGGACGTCG AGCGCATGGC CGAGGCCGCG CAGTACCTGA TCGGTACCCA TGATTTCAGT GCCTTCCGTG CCGGCCAGTG CCAGGCCAAG TCGCCGATCA AGCAGATGCA TCACCTGCGC GTGACCCGTC ACGGCAAAAT GATCGTTCTG GACATCCGCG CCAACGCGTT CCTGCACCAC ATGGTGCGCA ACATCGCCGG CGTGCTGATG ACCATCGGTG CCGGCGAGCG GCCGGTGGAG TGGATGAAAG AAGTGCTGGA GAGCCGTGAG CGGCGTTCCG GCGGGGTCAC GGCGCATCCG TTCGGCCTGT ATCTGGTGCA GGTCGAGTAC CACGACGAGT TCCCGTTGCC CGAGCGTTTC ATCGGGCCAC ATTTCCTTAC GGGTTTCGCG GAACTTGACG GCTGA
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Protein sequence | MAPEGFFRVA LGVEYKGSRY SGWQRQSTGV LTVQETLEKA LSKVADSPIS LQCAGRTDAG VHACGQVVHF DTQVDRSLKA WVMGANINLP HDISVSWAKI MPAHFHARFK AIARRYRYVI YNDQIRPAHL NEEITWNHRP LDVERMAEAA QYLIGTHDFS AFRAGQCQAK SPIKQMHHLR VTRHGKMIVL DIRANAFLHH MVRNIAGVLM TIGAGERPVE WMKEVLESRE RRSGGVTAHP FGLYLVQVEY HDEFPLPERF IGPHFLTGFA ELDG
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