Gene Pfl01_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1896 
SymboltruA 
ID3716347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2167466 
End bp2168290 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_347628 
Protein GI77458123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCG AAGGCTTTTT CCGCGTCGCG CTGGGCGTTG AATACAAGGG CTCGCGCTAC 
AGCGGCTGGC AGCGTCAGTC CACCGGTGTG CTCACCGTGC AGGAAACCCT GGAAAAAGCC
CTGTCGAAGG TCGCCGACTC GCCGATCTCG CTGCAATGCG CGGGGCGCAC CGACGCCGGT
GTGCATGCGT GCGGGCAAGT GGTGCATTTC GATACCCAGG TCGACCGCTC GCTGAAAGCC
TGGGTCATGG GCGCCAACAT CAATCTGCCC CACGACATCA GCGTCAGTTG GGCGAAGATC
ATGCCGGCGC ATTTCCATGC GCGATTCAAG GCGATTGCCC GGCGCTATCG CTATGTGATC
TACAACGATC AGATCCGCCC GGCGCATCTC AACGAAGAAA TCACCTGGAA TCACCGTCCG
CTGGACGTCG AGCGCATGGC CGAGGCCGCG CAGTACCTGA TCGGTACCCA TGATTTCAGT
GCCTTCCGTG CCGGCCAGTG CCAGGCCAAG TCGCCGATCA AGCAGATGCA TCACCTGCGC
GTGACCCGTC ACGGCAAAAT GATCGTTCTG GACATCCGCG CCAACGCGTT CCTGCACCAC
ATGGTGCGCA ACATCGCCGG CGTGCTGATG ACCATCGGTG CCGGCGAGCG GCCGGTGGAG
TGGATGAAAG AAGTGCTGGA GAGCCGTGAG CGGCGTTCCG GCGGGGTCAC GGCGCATCCG
TTCGGCCTGT ATCTGGTGCA GGTCGAGTAC CACGACGAGT TCCCGTTGCC CGAGCGTTTC
ATCGGGCCAC ATTTCCTTAC GGGTTTCGCG GAACTTGACG GCTGA
 
Protein sequence
MAPEGFFRVA LGVEYKGSRY SGWQRQSTGV LTVQETLEKA LSKVADSPIS LQCAGRTDAG 
VHACGQVVHF DTQVDRSLKA WVMGANINLP HDISVSWAKI MPAHFHARFK AIARRYRYVI
YNDQIRPAHL NEEITWNHRP LDVERMAEAA QYLIGTHDFS AFRAGQCQAK SPIKQMHHLR
VTRHGKMIVL DIRANAFLHH MVRNIAGVLM TIGAGERPVE WMKEVLESRE RRSGGVTAHP
FGLYLVQVEY HDEFPLPERF IGPHFLTGFA ELDG