Gene Pfl01_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1893 
Symbol 
ID3716344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2162218 
End bp2163330 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content62% 
IMG OID 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_347625 
Protein GI77458120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.353752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTG TAGGTCTGAT CGGTTGGCGC GGCATGGTCG GTTCCGTGCT CATGCAGCGG 
ATGCTGGAAG AGCAGGATTT CGATCTTATC GAGCCGGTGT TTTTCACCAC TTCCAATGTC
GGTGGCCAAG GCCCGTCCGT GGGCAAGGAC ATTGCTCCGC TCAAGGACGC TTACAGCATT
GAAGAGCTGA AGACCCTCGA CGTGATCCTG ACCTGCCAGG GCGGCGACTA CACCAGCGAA
GTGTTCCCGA AGCTGCGCGA AGCCGGCTGG CAGGGTTACT GGATCGACGC GGCCTCGAGC
CTGCGGATGA ACGACGACGC CGTCATCATT CTCGACCCGG TCAACCGCAA GGTCATCGAC
CAGCAGCTCG ATGCGGGCAC CAAGAACTAC ATCGGCGGCA ACTGCACCGT CAGCCTGATG
CTGATGGGCC TGGGCGGTCT GTTCGAGGCC GGTCTGGTCG AGTGGATGAG CGCCATGACC
TATCAGGCGG CCTCCGGCGC CGGCGCGCAG AACATGCGTG AACTGATCAA GCAGATGGGC
GCGACCCACG CCGCTGTCGC TGATCAACTG GCCGATCCTG CCAGCGCGAT CCTCGATATC
GACCGTCGTG TGGCCGAAGC CATGCGCAGC GACGCTTACC CGACCGAAAA CTTCGGTGTA
CCGCTGGCCG GCAGCCTGAT CCCTTGGATC GACAAGGAAC TGCCGAACGG CCAGAGCCGC
GAAGAGTGGA AGGCCCAGGC CGAGACCAAC AAGATCCTCG GTCGCTTCAA GAGCCCGATC
CCGGTCGACG GCATCTGCGT GCGCATCGGC GCCATGCGTT GCCACAGCCA GGCACTGACC
ATCAAGCTGA ACAAAGACGT GCCGATCGCC GACATCGAAG GGCTGATCAG CCAGCACAAC
CCTTGGGTCA AACTGGTGCC GAACAACCGC GAAATCAGCA TGCAGGAGCT GAGCCCGACG
AAAGTCACCG GCACCCTGAA CGTTCCGGTC GGTCGTCTGC GCAAGCTGAA CATGGGGTCG
CAGTTCGTCG GTGCTTTCAC CGTCGGCGAC CAACTGCTGT GGGGCGCGGC CGAACCGCTG
CGTCGCATGC TGCGGATCCT GCTTGAGCGT TGA
 
Protein sequence
MKRVGLIGWR GMVGSVLMQR MLEEQDFDLI EPVFFTTSNV GGQGPSVGKD IAPLKDAYSI 
EELKTLDVIL TCQGGDYTSE VFPKLREAGW QGYWIDAASS LRMNDDAVII LDPVNRKVID
QQLDAGTKNY IGGNCTVSLM LMGLGGLFEA GLVEWMSAMT YQAASGAGAQ NMRELIKQMG
ATHAAVADQL ADPASAILDI DRRVAEAMRS DAYPTENFGV PLAGSLIPWI DKELPNGQSR
EEWKAQAETN KILGRFKSPI PVDGICVRIG AMRCHSQALT IKLNKDVPIA DIEGLISQHN
PWVKLVPNNR EISMQELSPT KVTGTLNVPV GRLRKLNMGS QFVGAFTVGD QLLWGAAEPL
RRMLRILLER