Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1892 |
Symbol | |
ID | 3716343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2161069 |
End bp | 2162151 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_347624 |
Protein GI | 77458119 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.154027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AGATTCTGAT TCTCCCAGGC GACGGTATTG GTCCGGAAAT CATGGCCGAA GCGGTCAAGG TGCTGGAGCT GGCCAACGAA AAGTACAGCC TGGGCTTCGA GCTGAGCCAT GACGTGATCG GTGGCGCCGC CATCGACAAG CACGGCGTGC CGCTGGCCGA CGAAACCCTC GATCGTGCCC GCGCTGCCGA CGCTGTGCTG CTGGGCGCCG TGGGCGGCCC GAAATGGGAC ACCATCGAGC GTGACATCCG CCCTGAGCGC GGCCTGCTGA AAATCCGTGC GCAACTGGGC CTGTTCGGCA ACCTGCGTCC GGCGATCCTG TACCCGCAAC TGGCTGACGC TTCGAGCCTG AAGCCGGAAA TCGCTGCCGG CCTGGATATC CTGATCGTCC GTGAACTGAC CGGCGGCATC TACTTCGGCG CGCCGCGCGG CACCCGTACC CTGGAAAACG GCGAGCGCCA GTCCTACGAC ACCCTGCCGT ACAGTGAGAG TGAAATCCGC CGTATCGCCC GTGTCGGTTT CGACATGGCC CGCGTGCGTG GCAAGAAACT GTGCTCGGTG GACAAGGCCA ACGTGCTGGC GTCCAGCCAG CTGTGGCGTG AAGTGGTCGA GCAGGTCGCC AAGGATTACC CGGACGTCGA ACTGAGCCAT ATGTACGTCG ACAACGCCGC CATGCAACTG GTGCGTGCAC CGAAGCAGTT CGACGTGATC GTCACCGACA ACATGTTCGG TGACATCCTG TCCGACGAAG CGTCGATGCT CACCGGTTCC ATCGGCATGC TGCCTTCGGC CTCGCTGGAC GCCAACAACA AGGGCATGTA CGAGCCTTGC CACGGTTCGG CGCCGGACAT CGCGGGCAAA GGCATCGCCA ACCCGCTGGC GACCATCCTG TCGGTGTCGA TGATGCTGCG TTACAGCTTC AATCTGCACG AAGCGGCCGA TGCCATCGAA AAAGCGGTCA GCGTAGTGCT GGATCAAGGC CTGCGCACCG GCGACATCTT TTCGACCGGT TGCACTAAAG TCGGTACGCA GGAAATGGGT GACGCAGTAG TCGCCGCGCT GCGGAATCTG TAA
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Protein sequence | MSKQILILPG DGIGPEIMAE AVKVLELANE KYSLGFELSH DVIGGAAIDK HGVPLADETL DRARAADAVL LGAVGGPKWD TIERDIRPER GLLKIRAQLG LFGNLRPAIL YPQLADASSL KPEIAAGLDI LIVRELTGGI YFGAPRGTRT LENGERQSYD TLPYSESEIR RIARVGFDMA RVRGKKLCSV DKANVLASSQ LWREVVEQVA KDYPDVELSH MYVDNAAMQL VRAPKQFDVI VTDNMFGDIL SDEASMLTGS IGMLPSASLD ANNKGMYEPC HGSAPDIAGK GIANPLATIL SVSMMLRYSF NLHEAADAIE KAVSVVLDQG LRTGDIFSTG CTKVGTQEMG DAVVAALRNL
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