Gene Pfl01_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1892 
Symbol 
ID3716343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2161069 
End bp2162151 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content62% 
IMG OID 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_347624 
Protein GI77458119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.154027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AGATTCTGAT TCTCCCAGGC GACGGTATTG GTCCGGAAAT CATGGCCGAA 
GCGGTCAAGG TGCTGGAGCT GGCCAACGAA AAGTACAGCC TGGGCTTCGA GCTGAGCCAT
GACGTGATCG GTGGCGCCGC CATCGACAAG CACGGCGTGC CGCTGGCCGA CGAAACCCTC
GATCGTGCCC GCGCTGCCGA CGCTGTGCTG CTGGGCGCCG TGGGCGGCCC GAAATGGGAC
ACCATCGAGC GTGACATCCG CCCTGAGCGC GGCCTGCTGA AAATCCGTGC GCAACTGGGC
CTGTTCGGCA ACCTGCGTCC GGCGATCCTG TACCCGCAAC TGGCTGACGC TTCGAGCCTG
AAGCCGGAAA TCGCTGCCGG CCTGGATATC CTGATCGTCC GTGAACTGAC CGGCGGCATC
TACTTCGGCG CGCCGCGCGG CACCCGTACC CTGGAAAACG GCGAGCGCCA GTCCTACGAC
ACCCTGCCGT ACAGTGAGAG TGAAATCCGC CGTATCGCCC GTGTCGGTTT CGACATGGCC
CGCGTGCGTG GCAAGAAACT GTGCTCGGTG GACAAGGCCA ACGTGCTGGC GTCCAGCCAG
CTGTGGCGTG AAGTGGTCGA GCAGGTCGCC AAGGATTACC CGGACGTCGA ACTGAGCCAT
ATGTACGTCG ACAACGCCGC CATGCAACTG GTGCGTGCAC CGAAGCAGTT CGACGTGATC
GTCACCGACA ACATGTTCGG TGACATCCTG TCCGACGAAG CGTCGATGCT CACCGGTTCC
ATCGGCATGC TGCCTTCGGC CTCGCTGGAC GCCAACAACA AGGGCATGTA CGAGCCTTGC
CACGGTTCGG CGCCGGACAT CGCGGGCAAA GGCATCGCCA ACCCGCTGGC GACCATCCTG
TCGGTGTCGA TGATGCTGCG TTACAGCTTC AATCTGCACG AAGCGGCCGA TGCCATCGAA
AAAGCGGTCA GCGTAGTGCT GGATCAAGGC CTGCGCACCG GCGACATCTT TTCGACCGGT
TGCACTAAAG TCGGTACGCA GGAAATGGGT GACGCAGTAG TCGCCGCGCT GCGGAATCTG
TAA
 
Protein sequence
MSKQILILPG DGIGPEIMAE AVKVLELANE KYSLGFELSH DVIGGAAIDK HGVPLADETL 
DRARAADAVL LGAVGGPKWD TIERDIRPER GLLKIRAQLG LFGNLRPAIL YPQLADASSL
KPEIAAGLDI LIVRELTGGI YFGAPRGTRT LENGERQSYD TLPYSESEIR RIARVGFDMA
RVRGKKLCSV DKANVLASSQ LWREVVEQVA KDYPDVELSH MYVDNAAMQL VRAPKQFDVI
VTDNMFGDIL SDEASMLTGS IGMLPSASLD ANNKGMYEPC HGSAPDIAGK GIANPLATIL
SVSMMLRYSF NLHEAADAIE KAVSVVLDQG LRTGDIFSTG CTKVGTQEMG DAVVAALRNL