Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1890 |
Symbol | leuD |
ID | 3716341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2159552 |
End bp | 2160196 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_347622 |
Protein GI | 77458117 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.125264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCTT TTACCCAGCA CACTGGTCTC GTCGCGCCTC TGGATCGTGC CAACGTCGAC ACCGACCAGA TCATTCCGAA GCAGTTTCTG AAGTCGATCA AGCGCACCGG TTTCGGTCCG AACCTGTTCG ACGAGTGGCG TTACCTGGAT GTGGGTCAGC CGTATCAGGA CAACTCCAAG CGTCCGCTGA ACAAGGAATT CGTACTCAAC GCCGAGCGTT ATCAAGGCGC CAGCGTGTTG CTGGCCCGCG AAAACTTCGG CTGCGGCTCC AGCCGTGAAC ACGCGCCGTG GGCGCTGGAA GAATACGGTT TCCGCAGCAT CATCGCGCCG AGCTATGCCG ACATTTTCTT CAACAACAGC TTCAAGAACG GCTTGCTTCC GATCATCTTG AGCGACGCCG AAGTCGACGA GCTGTTCAAA CAGGTCGAGG CCGCGCCGGG CTATCAGTTG CAGATCGATC TGCACGAGCA GACCGTGACC AGCCCGAACG GCAAGGTCTA TCGCTTCGAG ATCGACGCCT TCCGCAAACA CTGCCTGCTC AATGGTCTGG ACGACATCGG CCTGACCCTG CAGGACGGCG ATGCGATTGC CGCGTTTGAA GCCAGGCATC GCGCGAGCCA GCCATGGTTG TTCCGCGACG CGTGA
|
Protein sequence | MKAFTQHTGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD VGQPYQDNSK RPLNKEFVLN AERYQGASVL LARENFGCGS SREHAPWALE EYGFRSIIAP SYADIFFNNS FKNGLLPIIL SDAEVDELFK QVEAAPGYQL QIDLHEQTVT SPNGKVYRFE IDAFRKHCLL NGLDDIGLTL QDGDAIAAFE ARHRASQPWL FRDA
|
| |