Gene Pfl01_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1890 
SymbolleuD 
ID3716341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2159552 
End bp2160196 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content59% 
IMG OID 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_347622 
Protein GI77458117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.125264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTT TTACCCAGCA CACTGGTCTC GTCGCGCCTC TGGATCGTGC CAACGTCGAC 
ACCGACCAGA TCATTCCGAA GCAGTTTCTG AAGTCGATCA AGCGCACCGG TTTCGGTCCG
AACCTGTTCG ACGAGTGGCG TTACCTGGAT GTGGGTCAGC CGTATCAGGA CAACTCCAAG
CGTCCGCTGA ACAAGGAATT CGTACTCAAC GCCGAGCGTT ATCAAGGCGC CAGCGTGTTG
CTGGCCCGCG AAAACTTCGG CTGCGGCTCC AGCCGTGAAC ACGCGCCGTG GGCGCTGGAA
GAATACGGTT TCCGCAGCAT CATCGCGCCG AGCTATGCCG ACATTTTCTT CAACAACAGC
TTCAAGAACG GCTTGCTTCC GATCATCTTG AGCGACGCCG AAGTCGACGA GCTGTTCAAA
CAGGTCGAGG CCGCGCCGGG CTATCAGTTG CAGATCGATC TGCACGAGCA GACCGTGACC
AGCCCGAACG GCAAGGTCTA TCGCTTCGAG ATCGACGCCT TCCGCAAACA CTGCCTGCTC
AATGGTCTGG ACGACATCGG CCTGACCCTG CAGGACGGCG ATGCGATTGC CGCGTTTGAA
GCCAGGCATC GCGCGAGCCA GCCATGGTTG TTCCGCGACG CGTGA
 
Protein sequence
MKAFTQHTGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD VGQPYQDNSK 
RPLNKEFVLN AERYQGASVL LARENFGCGS SREHAPWALE EYGFRSIIAP SYADIFFNNS
FKNGLLPIIL SDAEVDELFK QVEAAPGYQL QIDLHEQTVT SPNGKVYRFE IDAFRKHCLL
NGLDDIGLTL QDGDAIAAFE ARHRASQPWL FRDA