| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1887 |
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| Symbol | |
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| ID | 3716338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2153744 |
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| End bp | 2157022 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_347619 |
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| Protein GI | 77458114 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAT CTGTTGACCG TATTCCGCCG ATGCCGCGTA TTCAGGCCAT TGATCCACGG
CGATCCGAGC AGAGCTGGGA GAGTGCGCCG CAATTGCTCG CGGCGCTCAA CGGTGCCCGG
CTTGGCGCCT GGTACTGGGA CATCGAGCGC GGGCAGATCA GCTGGTCGCG CGGCACTCAG
GCCTTGTTCG GCTTCGACCC GCGGCAACCG CTGCCCGAAG ACCTGGAATA CCTCGATCTG
CTGCCACCGG AAGACCGGGC GAAAACCATC CGCGCCTTCC ACGCGGTGAT TGCCGGTGCG
CCGCTGGAAC AGGCGATGCA CCACCGCATC CGCTGGCCCG ACGGCAGCCT GCACTGGCTG
GAGATCAACG GCAGCCTGCT CCCCGACAAA CACGGTCGCC CCCGAATGAT CGGGGTGATC
CGCGAAATCA CCCACCAGCG GCAACGGGAA CAGGCGCTCA GCAGTTCGGA GAAACGTTTT
GCGACACTGT TTCATCTGTG CCCGAACATG GTGCTGCTGA CCCGTCAGGA AGACGGCCTG
ATCAGCGAGG CCAACCAGTA TTTCGAAAGC CTGTTCGGCT GGCCGGTGCA GAGCGCCATC
GGGCGCACCA CCCTGGAACT GGGCCTGTGG GTGCATCCCG AGCAGCGGGC GGAGCTGGTC
AAGAAGACCA AGGCCAAGGG CGAACTGGTC AGCATGGAGG TGCAGTTCCG CGCCAGCAAT
GGCCAGATCC ACGACGGCAT CCTCAGCGCG CAAAAGGTCG AACTCGAAGG CCAGCCTTAC
CTGCTCAGCA CTTTTCTCGA CACTACCGAA CGAAAAGCCG CCGAACATGC CCTGAAAGAC
AGCCAGGAAC GCCTCGACCT GGCGCTGGAT TCGGCGCAAC TCGGCACCTG GGACTGGCAC
ATTCCCAGCG GCATGCTCTA CGGCTCGGCC CGCGCTGCGC AATTACACGG CCTGGAGCCG
AAACCGTTCC ACGAATCGTT CGAAGAGTTT TTCGAGGGCG TACCCGGCGA AGAGCGCGAC
AGCATGCGCG ACGCCTATCG CAGCCTGCGC GAAGGCCCGG CGGGCAATTA TCAGCTGACT
TACCGCGTGC AATTGCCGGA CGGCAGCTCG CGCTATCTGG AAAGCCGCGC CCGCCTCTAT
CGCGACGACA ACGGCGTACC GCTGCGGATG GCCGGCACCC TGCTGGACAT CACCGATCAG
GTCGAACGCG AACAACGGCT GGTGGCTTCG GAAGAGAAAT TCGCCACGCT GTTCCAGGTC
AGCCCCGACC CGATCTGCGT CACGCGCCAG GAAACCGGGG AATTCATCGA GATCAACTCC
AGTTTCTCCC AGACCTTCGG CTGGAGCGCC AGCGATGTGA TCGGCCACAC CGCCGAAGAA
ATCGGCCTGT GGGACGCCTC GGCGAAAAGC CTGCAACGCA TCGAACGGGT GATCCGCGAA
CAGGGCCTGA GCAATGTCGC GATCATCGTC CAGCACAAGG ACGGCCAGTC GCTGACCTGC
GTGATTTCCA GCCGGCAGAT CAGCGTCGGC AACCAGCCGT GCATCGTTAC CACGCTGCGC
GACATCACCC AGCAACAACG CTCGGAAGCG GCGCTCAAGG CCAGCGAAGA GAAATTCGCC
AAGGCGTTCC ACTCCAGCCC CGACGCCATC ACCATCACCG AGCGCGACAC CGGACGTTAT
CTGGAGGTCA ACGACGGTTT CTGCCGCCTC ACCGGCTACC GCGCCGACGA AGTGGTGGGC
AAAACCGTGT ATCAGGTCGG CATCTGGGCC GAAGAAAAAC AGCGTTCTGC ACTGCTTGCG
GAGCTGCAGA TCAAGGGCCG CGTACACCAT CAGGAAATGC TCGGGCGCAA CAAGCGCGGC
GAGATCCTGA CGGTGGAAGT CTCGGTCGAA CCGATCACTC TCAACGAAAC CGCCTGCCTG
TTGCTCACGG CCCGGGACGT CAGCCTGCTG AAGAACGCCG AGGCGCAGAT CCGCCACTTG
GCTTATCACG ACCCGCTGAC CAACCTGCCC AACCGCGCAC TGCTGATGGA TCGCCTGAGC
CAGCAGATCG CCCTGCTCAA GCGCCACAAC CTGCGCGGCG CGCTGCTGTT TCTCGATCTG
GATCACTTCA AGCACATCAA CGACTCGCTG GGGCACCCGG TTGGCGACAC GGTGCTGAAA
ATCATCACCG CACGACTTGA GGCCAGCGTA CGCATGGAAG ACACGGTGGC GCGGCTCGGT
GGCGATGAGT TCGTGGTGTT GCTCAGCGGT CTGGAGGGCA CGCGCAATGA AGTCAGTGCC
CAGGTGCGCG AGCTGGCCGA CACCATTCGC GAGTTGCTGT CGGAGCCGAT GTTCCTCGAC
GGCCAGCGCC TGCAAGTGAC GCCGAGCATC GGCGTGGCGC TGATTCCCGA TCACGGCTCG
ACCCCGACCG ACCTGCTCAA ACGCGCCGAC ATTGCGCTGT ACCGGGCCAA GGATTCGGGG
CGCAACACCA CGCAGATGTA TCACAACACC ATGCAGAAAG CGGCCAGCGA ACGGCTGCGC
ATGGAGACCG ACCTGCGCCT GGCGCTGTCC CGTGGCGAAT TCGACGTGCA TTACCAACCG
CAAATCGACG CCCGGGACAA TCGCATCATC GGCGCCGAAG CCCTGGTGCG CTGGAATCAC
CCGGAACTCG GCGCGCAATC ACCCACCGAA TTCATCAAGG TGCTGGAAGA CAGCGGGCTG
ATTCTGGAGG TCGGCACCTG GATCCTCGAC GAGGCGTGCG AAGCCTTCAA GCAATTGATC
GCCGAAAAGC TGATCGATCC TCTGGCCTTC AGCCTGTGCG TGAACATCAG CCCCCGGCAG
TTCCGCCAGA ACGACTTCGT CGAGCGCATC GAACACAGCA TGAGCAGCCA CGGCCTGCCC
TGCTCGTTGC TGAAACTGGA GATCACCGAA GGTATCGTCA TTCAGAACCT GGAAGACACC
ATCAGCAAGA TGCGTCGCCT GAAAAAACTC GGCGTGAGTT TTGCCATGGA CGATTTCGGC
ACCGGCTATT CATCGCTGAC CTATCTGAAA CGATTGCCGG TAGACACGCT GAAGATCGAT
CAGTCGTTCA TCCGCGACGC CACCACCGAC CCCAACGACG CCGAAATCAT CCGCGCCATC
GTCGCCATGG CCCGCAGCCT GGAATTGGAG GTGATCGCCG AAGGCGTGGA AACCCCGGAA
CAGCTGGCCT TCCTGCAGGG GTTGGGCTGC CATTTGTATC AGGGTTATCT GCACAGCCGG
CCGTTGCCGC TTGAGGGATT GAAGGGATTG CTGGAATGA
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| Protein sequence | MPKSVDRIPP MPRIQAIDPR RSEQSWESAP QLLAALNGAR LGAWYWDIER GQISWSRGTQ
ALFGFDPRQP LPEDLEYLDL LPPEDRAKTI RAFHAVIAGA PLEQAMHHRI RWPDGSLHWL
EINGSLLPDK HGRPRMIGVI REITHQRQRE QALSSSEKRF ATLFHLCPNM VLLTRQEDGL
ISEANQYFES LFGWPVQSAI GRTTLELGLW VHPEQRAELV KKTKAKGELV SMEVQFRASN
GQIHDGILSA QKVELEGQPY LLSTFLDTTE RKAAEHALKD SQERLDLALD SAQLGTWDWH
IPSGMLYGSA RAAQLHGLEP KPFHESFEEF FEGVPGEERD SMRDAYRSLR EGPAGNYQLT
YRVQLPDGSS RYLESRARLY RDDNGVPLRM AGTLLDITDQ VEREQRLVAS EEKFATLFQV
SPDPICVTRQ ETGEFIEINS SFSQTFGWSA SDVIGHTAEE IGLWDASAKS LQRIERVIRE
QGLSNVAIIV QHKDGQSLTC VISSRQISVG NQPCIVTTLR DITQQQRSEA ALKASEEKFA
KAFHSSPDAI TITERDTGRY LEVNDGFCRL TGYRADEVVG KTVYQVGIWA EEKQRSALLA
ELQIKGRVHH QEMLGRNKRG EILTVEVSVE PITLNETACL LLTARDVSLL KNAEAQIRHL
AYHDPLTNLP NRALLMDRLS QQIALLKRHN LRGALLFLDL DHFKHINDSL GHPVGDTVLK
IITARLEASV RMEDTVARLG GDEFVVLLSG LEGTRNEVSA QVRELADTIR ELLSEPMFLD
GQRLQVTPSI GVALIPDHGS TPTDLLKRAD IALYRAKDSG RNTTQMYHNT MQKAASERLR
METDLRLALS RGEFDVHYQP QIDARDNRII GAEALVRWNH PELGAQSPTE FIKVLEDSGL
ILEVGTWILD EACEAFKQLI AEKLIDPLAF SLCVNISPRQ FRQNDFVERI EHSMSSHGLP
CSLLKLEITE GIVIQNLEDT ISKMRRLKKL GVSFAMDDFG TGYSSLTYLK RLPVDTLKID
QSFIRDATTD PNDAEIIRAI VAMARSLELE VIAEGVETPE QLAFLQGLGC HLYQGYLHSR
PLPLEGLKGL LE
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