Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1879 |
Symbol | |
ID | 3716330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2144893 |
End bp | 2145432 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_347611 |
Protein GI | 77458106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA AGAAAGCTCA AACCCGCGAA CGCATTCTCA AGGCCGCCAG TGCTGCACTG ATCCAGCGCG GTCCGGCTGA ACCGAGCGTG GGCGAAGTGA TGGGGGCGGC CGGCCTGACC GTCGGTGGCT TCTACGCCCA CTTCGAAAGC AAGGACGCAA TGATGCTTGA GGCGTTCAAG CAATTGCTCG GTCGCCGTCG CGACCTGATT GCCGACATGG ACAGCGAGCT GACCGGTGAG GAGCGCCGCG CCCTGGTGGC TGCTTTCTAC CTGTCGCGCA AGCACCGTGA TTCCAGCGAT TCGGCCTGCC CGATTCCGGC CTCCATCGGC GAGCTGGGCC GTCTACCGGA GGCGTTCCGG ATCGCGTTGA ACGAACACCT GGAATTGATG ATTGCGCAGT TGGCCGCAAC GCCGGAAGAC ACCGACAAAG CGTTGGCCGA CGTGGCCTTG ATGGTGGGAG GCCTGGCGCT CGCCAGGGCG TTGGGCCCTG GGGATTTATC CGATCGATTG CTGCGCGCTG CCAAGTCGGC GGTGCGTTGA
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Protein sequence | MNDKKAQTRE RILKAASAAL IQRGPAEPSV GEVMGAAGLT VGGFYAHFES KDAMMLEAFK QLLGRRRDLI ADMDSELTGE ERRALVAAFY LSRKHRDSSD SACPIPASIG ELGRLPEAFR IALNEHLELM IAQLAATPED TDKALADVAL MVGGLALARA LGPGDLSDRL LRAAKSAVR
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