Gene Pfl01_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1875 
Symbol 
ID3716355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2137616 
End bp2139631 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content62% 
IMG OID 
Productexcinuclease ABC subunit B 
Protein accessionYP_347607 
Protein GI77458102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT TCCAGCTCGT CACCCGTTTC GACCCCGCCG GCGATCAACC CGAAGCCATT 
CGCCTGATGG TCGAAGGCAT CGAAGCCGGG CTGTCGCACC AGACGCTGCT CGGGGTGACC
GGGTCGGGCA AGACCTTCAG CATCGCCAAT GTGATCGCCC AGGTGCAGCG TCCGACGCTG
GTGCTGGCGC CGAACAAGAC CCTGGCCGCG CAGTTGTACG GCGAGTTCAA GTCGTTCTTC
CCGAACAACG CCGTCGAATA CTTCGTTTCC TACTACGACT ACTACCAGCC CGAAGCCTAT
GTGCCGTCGT CCGACACCTT TATCGAGAAG GATGCGTCGA TCAACGACCA TATCGAGCAG
ATGCGGCTGT CGGCGACCAA GGCACTGCTC GAGCGCAAGG ACGCGATCAT CGTCACCACG
GTGTCGTGCA TCTACGGTCT GGGCAGCCCG GAAACCTATT TGAAAATGGT CCTGCACGTC
GATCGCGGCG ACAAGCTCGA TCAACGTGCG CTGGTGAGGC GCCTGGCCGA CCTGCAATAC
ACCCGCAACG ACATGGATTT CGCCCGTGCG ACCTTCCGTG TGCGCGGCGA TGTGATCGAC
ATCTACCCGG CGGAATCCGA CCTGGAAGCG ATCCGCATCG AGCTGTTCGA TGACGAGGTG
GAGAGCATTT CTGCGTTCGA CCCGCTGACC GGCGAAGTCA TCCGCAAGCT GCCGCGCTTC
ACCTTCTACC CGAAGAGCCA CTACGTGACG CCCCGGGAAA CCCTGCTCGA CGCCATCGAG
GGGATCAAGG TCGAGTTGCA GGAGCGCCTG GAATACCTGC GCAACAACAA CAAACTGGTG
GAAGCCCAGC GTCTTGAGCA GCGCACCCGG TTCGACCTGG AGATGATCCT CGAACTCGGC
TACTGCAACG GCATCGAAAA CTACTCGCGC TACCTGTCCG GACGCCCGGC TGGTGCGGCG
CCGCCGACGC TCTACGATTA CCTGCCGGCC GATGCGTTGC TGGTGATCGA CGAATCCCAC
GTCAGCGTGC CGCAAGTCGG CGCGATGTAT AAGGGCGACC GCTCGCGCAA AGAAACTCTC
GTGGAGTACG GCTTCCGCCT GCCGTCGGCG CTGGACAACC GGCCGATGCG CTTCGACGAG
TGGGAAGGGG TGAGCCCACA GACGATTTTC GTCTCGGCCA CGCCCGGCAA CTACGAAGCC
GAGCATGCCG GGCGGGTGAT CGAACAGGTT GTGCGCCCGA CCGGTCTGGT CGACCCGCAG
GTCGAAGTGC GGCCGGCGCT GACTCAGGTT GACGATCTAT TGTCGGAAAT CACCAAGCGT
GTGGCGGTGG AGGAGCGGGT GCTGGTTACC ACGCTGACCA AGCGCATGGC CGAAGACCTG
ACCGATTACC TGGCCGATCA CGGCGTACGC GTGCGTTATC TGCACTCGGA CATCGACACC
GTCGAGCGGG TCGAAATCAT CCGCGACCTG CGTTTGGGCA CGTTCGATGT GCTGGTGGGG
ATCAACCTGC TGCGTGAAGG TCTGGACATG CCGGAAGTGT CGCTGGTGGC GATTCTCGAC
GCGGACAAGG AAGGCTTCCT GCGTTCCGAG CGTTCGCTGA TCCAGACCAT CGGCCGGGCG
GCACGTAACC TCAATGGCCG GGCGATTCTC TACGCGGATC GCATCACCGG TTCGATGGAG
CGCGCCATCG GCGAAACCGA ACGCCGTCGT GACAAACAGA TCGCCTTCAA TCTGGCCAAC
GGCATCACGC CGAAGGGCGT GTTCAAGGAC GTCGCCGACA TCATGGAAGG CGCCACCGTG
CCCGGTTCGC GCAGCAAGAA GCGCAAAGGC ATGGCCAAGG CCGCCGAAGA GAACGCCAAG
TACGAAGCCG AACTGCGCTC GCCGAGCGAG ATCACCAAGC GCATCCGCCA ACTGGAAGAG
AAGATGTACC AGCTGGCCCG CGACCTGGAA TTCGAAGCGG CAGCACAGAT GCGCGACGAA
ATCGCCAAGC TGCGTGAGCG GCTGTTGGCC GTTTAA
 
Protein sequence
MSEFQLVTRF DPAGDQPEAI RLMVEGIEAG LSHQTLLGVT GSGKTFSIAN VIAQVQRPTL 
VLAPNKTLAA QLYGEFKSFF PNNAVEYFVS YYDYYQPEAY VPSSDTFIEK DASINDHIEQ
MRLSATKALL ERKDAIIVTT VSCIYGLGSP ETYLKMVLHV DRGDKLDQRA LVRRLADLQY
TRNDMDFARA TFRVRGDVID IYPAESDLEA IRIELFDDEV ESISAFDPLT GEVIRKLPRF
TFYPKSHYVT PRETLLDAIE GIKVELQERL EYLRNNNKLV EAQRLEQRTR FDLEMILELG
YCNGIENYSR YLSGRPAGAA PPTLYDYLPA DALLVIDESH VSVPQVGAMY KGDRSRKETL
VEYGFRLPSA LDNRPMRFDE WEGVSPQTIF VSATPGNYEA EHAGRVIEQV VRPTGLVDPQ
VEVRPALTQV DDLLSEITKR VAVEERVLVT TLTKRMAEDL TDYLADHGVR VRYLHSDIDT
VERVEIIRDL RLGTFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA
ARNLNGRAIL YADRITGSME RAIGETERRR DKQIAFNLAN GITPKGVFKD VADIMEGATV
PGSRSKKRKG MAKAAEENAK YEAELRSPSE ITKRIRQLEE KMYQLARDLE FEAAAQMRDE
IAKLRERLLA V