Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1875 |
Symbol | |
ID | 3716355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2137616 |
End bp | 2139631 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | excinuclease ABC subunit B |
Protein accession | YP_347607 |
Protein GI | 77458102 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT TCCAGCTCGT CACCCGTTTC GACCCCGCCG GCGATCAACC CGAAGCCATT CGCCTGATGG TCGAAGGCAT CGAAGCCGGG CTGTCGCACC AGACGCTGCT CGGGGTGACC GGGTCGGGCA AGACCTTCAG CATCGCCAAT GTGATCGCCC AGGTGCAGCG TCCGACGCTG GTGCTGGCGC CGAACAAGAC CCTGGCCGCG CAGTTGTACG GCGAGTTCAA GTCGTTCTTC CCGAACAACG CCGTCGAATA CTTCGTTTCC TACTACGACT ACTACCAGCC CGAAGCCTAT GTGCCGTCGT CCGACACCTT TATCGAGAAG GATGCGTCGA TCAACGACCA TATCGAGCAG ATGCGGCTGT CGGCGACCAA GGCACTGCTC GAGCGCAAGG ACGCGATCAT CGTCACCACG GTGTCGTGCA TCTACGGTCT GGGCAGCCCG GAAACCTATT TGAAAATGGT CCTGCACGTC GATCGCGGCG ACAAGCTCGA TCAACGTGCG CTGGTGAGGC GCCTGGCCGA CCTGCAATAC ACCCGCAACG ACATGGATTT CGCCCGTGCG ACCTTCCGTG TGCGCGGCGA TGTGATCGAC ATCTACCCGG CGGAATCCGA CCTGGAAGCG ATCCGCATCG AGCTGTTCGA TGACGAGGTG GAGAGCATTT CTGCGTTCGA CCCGCTGACC GGCGAAGTCA TCCGCAAGCT GCCGCGCTTC ACCTTCTACC CGAAGAGCCA CTACGTGACG CCCCGGGAAA CCCTGCTCGA CGCCATCGAG GGGATCAAGG TCGAGTTGCA GGAGCGCCTG GAATACCTGC GCAACAACAA CAAACTGGTG GAAGCCCAGC GTCTTGAGCA GCGCACCCGG TTCGACCTGG AGATGATCCT CGAACTCGGC TACTGCAACG GCATCGAAAA CTACTCGCGC TACCTGTCCG GACGCCCGGC TGGTGCGGCG CCGCCGACGC TCTACGATTA CCTGCCGGCC GATGCGTTGC TGGTGATCGA CGAATCCCAC GTCAGCGTGC CGCAAGTCGG CGCGATGTAT AAGGGCGACC GCTCGCGCAA AGAAACTCTC GTGGAGTACG GCTTCCGCCT GCCGTCGGCG CTGGACAACC GGCCGATGCG CTTCGACGAG TGGGAAGGGG TGAGCCCACA GACGATTTTC GTCTCGGCCA CGCCCGGCAA CTACGAAGCC GAGCATGCCG GGCGGGTGAT CGAACAGGTT GTGCGCCCGA CCGGTCTGGT CGACCCGCAG GTCGAAGTGC GGCCGGCGCT GACTCAGGTT GACGATCTAT TGTCGGAAAT CACCAAGCGT GTGGCGGTGG AGGAGCGGGT GCTGGTTACC ACGCTGACCA AGCGCATGGC CGAAGACCTG ACCGATTACC TGGCCGATCA CGGCGTACGC GTGCGTTATC TGCACTCGGA CATCGACACC GTCGAGCGGG TCGAAATCAT CCGCGACCTG CGTTTGGGCA CGTTCGATGT GCTGGTGGGG ATCAACCTGC TGCGTGAAGG TCTGGACATG CCGGAAGTGT CGCTGGTGGC GATTCTCGAC GCGGACAAGG AAGGCTTCCT GCGTTCCGAG CGTTCGCTGA TCCAGACCAT CGGCCGGGCG GCACGTAACC TCAATGGCCG GGCGATTCTC TACGCGGATC GCATCACCGG TTCGATGGAG CGCGCCATCG GCGAAACCGA ACGCCGTCGT GACAAACAGA TCGCCTTCAA TCTGGCCAAC GGCATCACGC CGAAGGGCGT GTTCAAGGAC GTCGCCGACA TCATGGAAGG CGCCACCGTG CCCGGTTCGC GCAGCAAGAA GCGCAAAGGC ATGGCCAAGG CCGCCGAAGA GAACGCCAAG TACGAAGCCG AACTGCGCTC GCCGAGCGAG ATCACCAAGC GCATCCGCCA ACTGGAAGAG AAGATGTACC AGCTGGCCCG CGACCTGGAA TTCGAAGCGG CAGCACAGAT GCGCGACGAA ATCGCCAAGC TGCGTGAGCG GCTGTTGGCC GTTTAA
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Protein sequence | MSEFQLVTRF DPAGDQPEAI RLMVEGIEAG LSHQTLLGVT GSGKTFSIAN VIAQVQRPTL VLAPNKTLAA QLYGEFKSFF PNNAVEYFVS YYDYYQPEAY VPSSDTFIEK DASINDHIEQ MRLSATKALL ERKDAIIVTT VSCIYGLGSP ETYLKMVLHV DRGDKLDQRA LVRRLADLQY TRNDMDFARA TFRVRGDVID IYPAESDLEA IRIELFDDEV ESISAFDPLT GEVIRKLPRF TFYPKSHYVT PRETLLDAIE GIKVELQERL EYLRNNNKLV EAQRLEQRTR FDLEMILELG YCNGIENYSR YLSGRPAGAA PPTLYDYLPA DALLVIDESH VSVPQVGAMY KGDRSRKETL VEYGFRLPSA LDNRPMRFDE WEGVSPQTIF VSATPGNYEA EHAGRVIEQV VRPTGLVDPQ VEVRPALTQV DDLLSEITKR VAVEERVLVT TLTKRMAEDL TDYLADHGVR VRYLHSDIDT VERVEIIRDL RLGTFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA ARNLNGRAIL YADRITGSME RAIGETERRR DKQIAFNLAN GITPKGVFKD VADIMEGATV PGSRSKKRKG MAKAAEENAK YEAELRSPSE ITKRIRQLEE KMYQLARDLE FEAAAQMRDE IAKLRERLLA V
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